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Cluster: HRGMv2_3542_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3542_1 HRGMv2_3542_1_61 75071 76054 + 9.B.146.1.6
TC HRGMv2_3542_1 HRGMv2_3542_1_62 76077 77249 + 2.A.103.1.3
CAZyme HRGMv2_3542_1 HRGMv2_3542_1_63 77273 78397 + GT28
pfam HRGMv2_3542_1 HRGMv2_3542_1_64 78387 80489 + Topoisom_bac | Zn_ribbon_Top1 | Zn_ribbon_Top1 | Toprim
TC HRGMv2_3542_1 HRGMv2_3542_1_65 80501 81979 + 2.A.1.15.16
pfam HRGMv2_3542_1 HRGMv2_3542_1_66 81996 83033 + tRNA-synt_2d | Phe_tRNA-synt_N
pfam HRGMv2_3542_1 HRGMv2_3542_1_67 83057 85447 + tRNA_bind | FDX-ACB | B3_4 | B5 | tRNA_synthFbeta
TC HRGMv2_3542_1 HRGMv2_3542_1_68 85543 86217 + 1.C.113.1.3
Gene ID: HRGMv2_3542_1_61
Type: TC
Location: 75071 - 76054 (+)
Gene ID: HRGMv2_3542_1_62
Type: TC
Location: 76077 - 77249 (+)
Gene ID: HRGMv2_3542_1_63
Type: CAZyme
Location: 77273 - 78397 (+)
Gene ID: HRGMv2_3542_1_64
Type: pfam
Location: 78387 - 80489 (+)
Gene ID: HRGMv2_3542_1_65
Type: TC
Location: 80501 - 81979 (+)
Gene ID: HRGMv2_3542_1_66
Type: pfam
Location: 81996 - 83033 (+)
Gene ID: HRGMv2_3542_1_67
Type: pfam
Location: 83057 - 85447 (+)
Gene ID: HRGMv2_3542_1_68
Type: TC
Location: 85543 - 86217 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
UMGS1901
→
Species
UMGS1901 sp900553755

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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