Cluster: HRGMv2_3538_CGC3
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3538
- CGC Family ID: CGCFAM_00671
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3538_2 | HRGMv2_3538_2_54 | 49011 | 50132 | - | GT4 |
| pfam | HRGMv2_3538_2 | HRGMv2_3538_2_55 | 50161 | 51552 | - | O-antigen_lig |
| CAZyme | HRGMv2_3538_2 | HRGMv2_3538_2_56 | 51639 | 52688 | - | GT2 |
| pfam | HRGMv2_3538_2 | HRGMv2_3538_2_57 | 52678 | 53040 | - | DUF2304 |
| CAZyme | HRGMv2_3538_2 | HRGMv2_3538_2_58 | 53042 | 53755 | - | GT2 |
| pfam | HRGMv2_3538_2 | HRGMv2_3538_2_59 | 53783 | 55201 | - | DUF2142 |
| CAZyme | HRGMv2_3538_2 | HRGMv2_3538_2_60 | 55194 | 57374 | - | GT4 | GT4 |
| pfam | HRGMv2_3538_2 | HRGMv2_3538_2_61 | 57419 | 58216 | - | Glycos_transf_2 |
| TC | HRGMv2_3538_2 | HRGMv2_3538_2_62 | 58316 | 59092 | - | 3.A.1.103.5 |
| TC | HRGMv2_3538_2 | HRGMv2_3538_2_63 | 59131 | 59871 | - | 3.A.1.103.4 |
Gene ID: HRGMv2_3538_2_54
Type: CAZyme
Location: 49011 - 50132 (-)
Type: CAZyme
Location: 49011 - 50132 (-)
Gene ID: HRGMv2_3538_2_55
Type: pfam
Location: 50161 - 51552 (-)
Type: pfam
Location: 50161 - 51552 (-)
Gene ID: HRGMv2_3538_2_56
Type: CAZyme
Location: 51639 - 52688 (-)
Type: CAZyme
Location: 51639 - 52688 (-)
Gene ID: HRGMv2_3538_2_57
Type: pfam
Location: 52678 - 53040 (-)
Type: pfam
Location: 52678 - 53040 (-)
Gene ID: HRGMv2_3538_2_58
Type: CAZyme
Location: 53042 - 53755 (-)
Type: CAZyme
Location: 53042 - 53755 (-)
Gene ID: HRGMv2_3538_2_59
Type: pfam
Location: 53783 - 55201 (-)
Type: pfam
Location: 53783 - 55201 (-)
Gene ID: HRGMv2_3538_2_60
Type: CAZyme
Location: 55194 - 57374 (-)
Type: CAZyme
Location: 55194 - 57374 (-)
Gene ID: HRGMv2_3538_2_61
Type: pfam
Location: 57419 - 58216 (-)
Type: pfam
Location: 57419 - 58216 (-)
Gene ID: HRGMv2_3538_2_62
Type: TC
Location: 58316 - 59092 (-)
Type: TC
Location: 58316 - 59092 (-)
Gene ID: HRGMv2_3538_2_63
Type: TC
Location: 59131 - 59871 (-)
Type: TC
Location: 59131 - 59871 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Species
CAG-492 sp019417465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.