Cluster: HRGMv2_3537_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3537
- CGC Family ID: CGCFAM_00060
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3537_1 | HRGMv2_3537_1_1189 | 1148622 | 1149932 | - | 8.A.7.1.5 |
| pfam | HRGMv2_3537_1 | HRGMv2_3537_1_1190 | 1149904 | 1151247 | - | PPDK_N | PPDK_N | PPDK_N |
| pfam | HRGMv2_3537_1 | HRGMv2_3537_1_1191 | 1151545 | 1152543 | - | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd |
| CAZyme | HRGMv2_3537_1 | HRGMv2_3537_1_1192 | 1152560 | 1153129 | - | GH23 |
Gene ID: HRGMv2_3537_1_1189
Type: TC
Location: 1148622 - 1149932 (-)
Type: TC
Location: 1148622 - 1149932 (-)
Gene ID: HRGMv2_3537_1_1190
Type: pfam
Location: 1149904 - 1151247 (-)
Type: pfam
Location: 1149904 - 1151247 (-)
Gene ID: HRGMv2_3537_1_1191
Type: pfam
Location: 1151545 - 1152543 (-)
Type: pfam
Location: 1151545 - 1152543 (-)
Gene ID: HRGMv2_3537_1_1192
Type: CAZyme
Location: 1152560 - 1153129 (-)
Type: CAZyme
Location: 1152560 - 1153129 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Species
CAG-492 sp900553225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.