Cluster: HRGMv2_3537_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3537
- CGC Family ID: CGCFAM_06540
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3537_1 | HRGMv2_3537_1_1073 | 1043962 | 1044909 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3537_1 | HRGMv2_3537_1_1074 | 1044947 | 1045354 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3537_1 | HRGMv2_3537_1_1075 | 1045419 | 1046024 | - | TetR_N |
| TC | HRGMv2_3537_1 | HRGMv2_3537_1_1076 | 1046179 | 1046889 | + | 3.A.1.122.14 |
Gene ID: HRGMv2_3537_1_1073
Type: CAZyme
Location: 1043962 - 1044909 (+)
Type: CAZyme
Location: 1043962 - 1044909 (+)
Gene ID: HRGMv2_3537_1_1074
Type:
Location: 1044947 - 1045354 (+)
Type:
Location: 1044947 - 1045354 (+)
Gene ID: HRGMv2_3537_1_1075
Type: STP
Location: 1045419 - 1046024 (-)
Type: STP
Location: 1045419 - 1046024 (-)
Gene ID: HRGMv2_3537_1_1076
Type: TC
Location: 1046179 - 1046889 (+)
Type: TC
Location: 1046179 - 1046889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Species
CAG-492 sp900553225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3537_1_1076 | vegan > omnivore | 2.15423 | 0.03161 |