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Cluster: HRGMv2_3536_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3536_8 HRGMv2_3536_8_15 13518 15134 - 3.A.1.147.6
TC HRGMv2_3536_8 HRGMv2_3536_8_16 15138 15863 - 3.A.1.147.6
NULL(UNKNOWN) HRGMv2_3536_8 HRGMv2_3536_8_17 16048 16644 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3536_8 HRGMv2_3536_8_18 16692 17543 - Patatin
TC HRGMv2_3536_8 HRGMv2_3536_8_19 17568 19523 - 3.A.7.7.1
NULL(UNKNOWN) HRGMv2_3536_8 HRGMv2_3536_8_20 19537 20352 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3536_8 HRGMv2_3536_8_21 21040 21627 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3536_8 HRGMv2_3536_8_22 21671 22513 - CE4
Gene ID: HRGMv2_3536_8_15
Type: TC
Location: 13518 - 15134 (-)
Gene ID: HRGMv2_3536_8_16
Type: TC
Location: 15138 - 15863 (-)
Gene ID: HRGMv2_3536_8_17
Type:
Location: 16048 - 16644 (+)
Gene ID: HRGMv2_3536_8_18
Type: pfam
Location: 16692 - 17543 (-)
Gene ID: HRGMv2_3536_8_19
Type: TC
Location: 17568 - 19523 (-)
Gene ID: HRGMv2_3536_8_20
Type:
Location: 19537 - 20352 (-)
Gene ID: HRGMv2_3536_8_21
Type:
Location: 21040 - 21627 (+)
Gene ID: HRGMv2_3536_8_22
Type: CAZyme
Location: 21671 - 22513 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-245
→
Species
CAG-245 sp000434195

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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