Cluster: HRGMv2_3536_CGC4
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 11
- Substrate:
- Genome ID: HRGMv2_3536
- CGC Family ID: CGCFAM_01049
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_40 | 44537 | 45643 | + | GT4 |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_41 | 45636 | 46712 | + | GT2 |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_42 | 46725 | 48524 | + | GT32 |
| NULL(UNKNOWN) | HRGMv2_3536_4 | HRGMv2_3536_4_43 | 48550 | 48744 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_44 | 48747 | 49775 | + | GT4 |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_45 | 49789 | 50739 | + | GT2 |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_46 | 50752 | 51705 | + | GT2 |
| pfam | HRGMv2_3536_4 | HRGMv2_3536_4_47 | 51718 | 53511 | + | DUF6020 |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_48 | 53474 | 54412 | + | GT2 |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_49 | 54530 | 57301 | + | CBM13 | CBM13 | CBM13 |
| pfam | HRGMv2_3536_4 | HRGMv2_3536_4_50 | 57360 | 57986 | + | Cadherin-like |
| pfam | HRGMv2_3536_4 | HRGMv2_3536_4_51 | 58035 | 59570 | + | O-antigen_lig |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_52 | 59567 | 60727 | + | GT4 |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_53 | 60727 | 61626 | + | GT2 |
| TC | HRGMv2_3536_4 | HRGMv2_3536_4_54 | 61684 | 62421 | + | 3.A.1.103.4 |
| TC | HRGMv2_3536_4 | HRGMv2_3536_4_55 | 62422 | 63195 | + | 3.A.1.103.4 |
| TC | HRGMv2_3536_4 | HRGMv2_3536_4_56 | 63332 | 64456 | + | 9.B.146.1.1 |
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_57 | 64453 | 65400 | + | GT2 |
Gene ID: HRGMv2_3536_4_40
Type: CAZyme
Location: 44537 - 45643 (+)
Type: CAZyme
Location: 44537 - 45643 (+)
Gene ID: HRGMv2_3536_4_41
Type: CAZyme
Location: 45636 - 46712 (+)
Type: CAZyme
Location: 45636 - 46712 (+)
Gene ID: HRGMv2_3536_4_42
Type: CAZyme
Location: 46725 - 48524 (+)
Type: CAZyme
Location: 46725 - 48524 (+)
Gene ID: HRGMv2_3536_4_43
Type:
Location: 48550 - 48744 (+)
Type:
Location: 48550 - 48744 (+)
Gene ID: HRGMv2_3536_4_44
Type: CAZyme
Location: 48747 - 49775 (+)
Type: CAZyme
Location: 48747 - 49775 (+)
Gene ID: HRGMv2_3536_4_45
Type: CAZyme
Location: 49789 - 50739 (+)
Type: CAZyme
Location: 49789 - 50739 (+)
Gene ID: HRGMv2_3536_4_46
Type: CAZyme
Location: 50752 - 51705 (+)
Type: CAZyme
Location: 50752 - 51705 (+)
Gene ID: HRGMv2_3536_4_47
Type: pfam
Location: 51718 - 53511 (+)
Type: pfam
Location: 51718 - 53511 (+)
Gene ID: HRGMv2_3536_4_48
Type: CAZyme
Location: 53474 - 54412 (+)
Type: CAZyme
Location: 53474 - 54412 (+)
Gene ID: HRGMv2_3536_4_49
Type: CAZyme
Location: 54530 - 57301 (+)
Type: CAZyme
Location: 54530 - 57301 (+)
Gene ID: HRGMv2_3536_4_50
Type: pfam
Location: 57360 - 57986 (+)
Type: pfam
Location: 57360 - 57986 (+)
Gene ID: HRGMv2_3536_4_51
Type: pfam
Location: 58035 - 59570 (+)
Type: pfam
Location: 58035 - 59570 (+)
Gene ID: HRGMv2_3536_4_52
Type: CAZyme
Location: 59567 - 60727 (+)
Type: CAZyme
Location: 59567 - 60727 (+)
Gene ID: HRGMv2_3536_4_53
Type: CAZyme
Location: 60727 - 61626 (+)
Type: CAZyme
Location: 60727 - 61626 (+)
Gene ID: HRGMv2_3536_4_54
Type: TC
Location: 61684 - 62421 (+)
Type: TC
Location: 61684 - 62421 (+)
Gene ID: HRGMv2_3536_4_55
Type: TC
Location: 62422 - 63195 (+)
Type: TC
Location: 62422 - 63195 (+)
Gene ID: HRGMv2_3536_4_56
Type: TC
Location: 63332 - 64456 (+)
Type: TC
Location: 63332 - 64456 (+)
Gene ID: HRGMv2_3536_4_57
Type: CAZyme
Location: 64453 - 65400 (+)
Type: CAZyme
Location: 64453 - 65400 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-245
Species
CAG-245 sp000434195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.