Cluster: HRGMv2_3536_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3536
- CGC Family ID: CGCFAM_01066
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3536_4 | HRGMv2_3536_4_15 | 12052 | 14685 | + | GT51 |
| pfam | HRGMv2_3536_4 | HRGMv2_3536_4_16 | 14702 | 16114 | + | tRNA-synt_1e | tRNA-synt_1g | CysS_C |
| pfam | HRGMv2_3536_4 | HRGMv2_3536_4_17 | 16131 | 17198 | + | DUF1189 |
| TC | HRGMv2_3536_4 | HRGMv2_3536_4_18 | 17216 | 19051 | + | 3.A.16.1.2 |
| pfam | HRGMv2_3536_4 | HRGMv2_3536_4_19 | 19107 | 20384 | - | Spore_GerAC |
| pfam | HRGMv2_3536_4 | HRGMv2_3536_4_20 | 20396 | 21508 | - | Spore_permease |
| TC | HRGMv2_3536_4 | HRGMv2_3536_4_21 | 21558 | 23363 | - | 9.A.11.1.2 |
Gene ID: HRGMv2_3536_4_15
Type: CAZyme
Location: 12052 - 14685 (+)
Type: CAZyme
Location: 12052 - 14685 (+)
Gene ID: HRGMv2_3536_4_16
Type: pfam
Location: 14702 - 16114 (+)
Type: pfam
Location: 14702 - 16114 (+)
Gene ID: HRGMv2_3536_4_17
Type: pfam
Location: 16131 - 17198 (+)
Type: pfam
Location: 16131 - 17198 (+)
Gene ID: HRGMv2_3536_4_18
Type: TC
Location: 17216 - 19051 (+)
Type: TC
Location: 17216 - 19051 (+)
Gene ID: HRGMv2_3536_4_19
Type: pfam
Location: 19107 - 20384 (-)
Type: pfam
Location: 19107 - 20384 (-)
Gene ID: HRGMv2_3536_4_20
Type: pfam
Location: 20396 - 21508 (-)
Type: pfam
Location: 20396 - 21508 (-)
Gene ID: HRGMv2_3536_4_21
Type: TC
Location: 21558 - 23363 (-)
Type: TC
Location: 21558 - 23363 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-245
Species
CAG-245 sp000434195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.