Cluster: HRGMv2_3535_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3535
- CGC Family ID: CGCFAM_00011
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3535_45 | HRGMv2_3535_45_3 | 1857 | 5012 | + | GT2 |
| TC | HRGMv2_3535_45 | HRGMv2_3535_45_4 | 5012 | 5755 | + | 3.A.1.103.4 |
| TC | HRGMv2_3535_45 | HRGMv2_3535_45_5 | 5770 | 6543 | + | 3.A.1.103.1 |
| pfam | HRGMv2_3535_45 | HRGMv2_3535_45_6 | 6605 | 8110 | + | Glucos_trans_II |
| CAZyme | HRGMv2_3535_45 | HRGMv2_3535_45_7 | 8345 | 10552 | + | CBM13 |
| CAZyme | HRGMv2_3535_45 | HRGMv2_3535_45_8 | 10569 | 12476 | + | CBM13 | CBM13 | CBM13 |
Gene ID: HRGMv2_3535_45_3
Type: CAZyme
Location: 1857 - 5012 (+)
Type: CAZyme
Location: 1857 - 5012 (+)
Gene ID: HRGMv2_3535_45_4
Type: TC
Location: 5012 - 5755 (+)
Type: TC
Location: 5012 - 5755 (+)
Gene ID: HRGMv2_3535_45_5
Type: TC
Location: 5770 - 6543 (+)
Type: TC
Location: 5770 - 6543 (+)
Gene ID: HRGMv2_3535_45_6
Type: pfam
Location: 6605 - 8110 (+)
Type: pfam
Location: 6605 - 8110 (+)
Gene ID: HRGMv2_3535_45_7
Type: CAZyme
Location: 8345 - 10552 (+)
Type: CAZyme
Location: 8345 - 10552 (+)
Gene ID: HRGMv2_3535_45_8
Type: CAZyme
Location: 10569 - 12476 (+)
Type: CAZyme
Location: 10569 - 12476 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.