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Cluster: HRGMv2_3528_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3528_10 HRGMv2_3528_10_12 12081 13019 + GT2
pfam HRGMv2_3528_10 HRGMv2_3528_10_13 13032 14867 + DUF6020
pfam HRGMv2_3528_10 HRGMv2_3528_10_14 14921 16696 + DUF6020
CAZyme HRGMv2_3528_10 HRGMv2_3528_10_15 16713 17666 + GT2
CAZyme HRGMv2_3528_10 HRGMv2_3528_10_16 17672 18646 + GT2
pfam HRGMv2_3528_10 HRGMv2_3528_10_17 18655 20319 + DUF6020
CAZyme HRGMv2_3528_10 HRGMv2_3528_10_18 20319 21434 + GT4
pfam HRGMv2_3528_10 HRGMv2_3528_10_19 21436 22419 + Acyl_transf_3
CAZyme HRGMv2_3528_10 HRGMv2_3528_10_20 22416 23306 + GT2
pfam HRGMv2_3528_10 HRGMv2_3528_10_21 23383 26343 + Amidase_3
NULL(UNKNOWN) HRGMv2_3528_10 HRGMv2_3528_10_22 26729 30019 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3528_10 HRGMv2_3528_10_23 30149 30895 + 3.A.1.103.4
TC HRGMv2_3528_10 HRGMv2_3528_10_24 30932 31720 + 3.A.1.103.1
STP HRGMv2_3528_10 HRGMv2_3528_10_25 31786 32727 + Pribosyltran
pfam HRGMv2_3528_10 HRGMv2_3528_10_26 32724 33149 + GtrA_DPMS_TM
CAZyme HRGMv2_3528_10 HRGMv2_3528_10_27 33172 34122 + GT2
CAZyme HRGMv2_3528_10 HRGMv2_3528_10_28 34227 36131 + GH13_39
Gene ID: HRGMv2_3528_10_12
Type: CAZyme
Location: 12081 - 13019 (+)
Gene ID: HRGMv2_3528_10_13
Type: pfam
Location: 13032 - 14867 (+)
Gene ID: HRGMv2_3528_10_14
Type: pfam
Location: 14921 - 16696 (+)
Gene ID: HRGMv2_3528_10_15
Type: CAZyme
Location: 16713 - 17666 (+)
Gene ID: HRGMv2_3528_10_16
Type: CAZyme
Location: 17672 - 18646 (+)
Gene ID: HRGMv2_3528_10_17
Type: pfam
Location: 18655 - 20319 (+)
Gene ID: HRGMv2_3528_10_18
Type: CAZyme
Location: 20319 - 21434 (+)
Gene ID: HRGMv2_3528_10_19
Type: pfam
Location: 21436 - 22419 (+)
Gene ID: HRGMv2_3528_10_20
Type: CAZyme
Location: 22416 - 23306 (+)
Gene ID: HRGMv2_3528_10_21
Type: pfam
Location: 23383 - 26343 (+)
Gene ID: HRGMv2_3528_10_22
Type:
Location: 26729 - 30019 (+)
Gene ID: HRGMv2_3528_10_23
Type: TC
Location: 30149 - 30895 (+)
Gene ID: HRGMv2_3528_10_24
Type: TC
Location: 30932 - 31720 (+)
Gene ID: HRGMv2_3528_10_25
Type: STP
Location: 31786 - 32727 (+)
Gene ID: HRGMv2_3528_10_26
Type: pfam
Location: 32724 - 33149 (+)
Gene ID: HRGMv2_3528_10_27
Type: CAZyme
Location: 33172 - 34122 (+)
Gene ID: HRGMv2_3528_10_28
Type: CAZyme
Location: 34227 - 36131 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-269
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3528_10_12 vegan > omnivore 4.75227 0.00581
HRGMv2_3528_10_12 vegetarian > omnivore 4.39830 0.00358
HRGMv2_3528_10_26 vegan > omnivore 3.04454 0.00581
HRGMv2_3528_10_26 vegetarian > omnivore 1.86234 0.03130
HRGMv2_3528_10_27 vegetarian > omnivore 1.24458 0.03130

🧭 Explore Read Mapping of CGC

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