Cluster: HRGMv2_3528_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3528
- CGC Family ID: CGCFAM_00005
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3528_8 | HRGMv2_3528_8_39 | 39546 | 40193 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_3528_8 | HRGMv2_3528_8_40 | 40202 | 40960 | + | GT2 |
| pfam | HRGMv2_3528_8 | HRGMv2_3528_8_41 | 40963 | 41748 | + | Glycos_transf_2 |
| pfam | HRGMv2_3528_8 | HRGMv2_3528_8_42 | 41782 | 42789 | + | Stealth_CR2 | Stealth_CR1 |
| CAZyme | HRGMv2_3528_8 | HRGMv2_3528_8_43 | 42806 | 43798 | + | GT8 |
| NULL(UNKNOWN) | HRGMv2_3528_8 | HRGMv2_3528_8_44 | 43816 | 44961 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3528_8 | HRGMv2_3528_8_45 | 44963 | 46498 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_3528_8_39
Type: TC
Location: 39546 - 40193 (+)
Type: TC
Location: 39546 - 40193 (+)
Gene ID: HRGMv2_3528_8_40
Type: CAZyme
Location: 40202 - 40960 (+)
Type: CAZyme
Location: 40202 - 40960 (+)
Gene ID: HRGMv2_3528_8_41
Type: pfam
Location: 40963 - 41748 (+)
Type: pfam
Location: 40963 - 41748 (+)
Gene ID: HRGMv2_3528_8_42
Type: pfam
Location: 41782 - 42789 (+)
Type: pfam
Location: 41782 - 42789 (+)
Gene ID: HRGMv2_3528_8_43
Type: CAZyme
Location: 42806 - 43798 (+)
Type: CAZyme
Location: 42806 - 43798 (+)
Gene ID: HRGMv2_3528_8_44
Type:
Location: 43816 - 44961 (+)
Type:
Location: 43816 - 44961 (+)
Gene ID: HRGMv2_3528_8_45
Type: TC
Location: 44963 - 46498 (+)
Type: TC
Location: 44963 - 46498 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.