Cluster: HRGMv2_3528_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3528
- CGC Family ID: CGCFAM_06227
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3528_15 | HRGMv2_3528_15_6 | 3965 | 6001 | - | GH133 |
| pfam | HRGMv2_3528_15 | HRGMv2_3528_15_7 | 6017 | 7657 | - | CofD |
| pfam | HRGMv2_3528_15 | HRGMv2_3528_15_8 | 7712 | 8629 | - | FAD_binding_4 | MurB_C |
| TC | HRGMv2_3528_15 | HRGMv2_3528_15_9 | 9341 | 10399 | + | 9.A.5.3.2 |
Gene ID: HRGMv2_3528_15_6
Type: CAZyme
Location: 3965 - 6001 (-)
Type: CAZyme
Location: 3965 - 6001 (-)
Gene ID: HRGMv2_3528_15_7
Type: pfam
Location: 6017 - 7657 (-)
Type: pfam
Location: 6017 - 7657 (-)
Gene ID: HRGMv2_3528_15_8
Type: pfam
Location: 7712 - 8629 (-)
Type: pfam
Location: 7712 - 8629 (-)
Gene ID: HRGMv2_3528_15_9
Type: TC
Location: 9341 - 10399 (+)
Type: TC
Location: 9341 - 10399 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3528_15_8 | vegan > omnivore | 1.74948 | 0.00581 |