Cluster: HRGMv2_3528_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3528
- CGC Family ID: CGCFAM_00272
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3528_1 | HRGMv2_3528_1_90 | 86919 | 87731 | + | CE4 |
| pfam | HRGMv2_3528_1 | HRGMv2_3528_1_91 | 87762 | 87980 | + | ResIII |
| pfam | HRGMv2_3528_1 | HRGMv2_3528_1_92 | 88225 | 89718 | + | Helicase_C | UVR | UvrB | UvrB_inter |
| TC | HRGMv2_3528_1 | HRGMv2_3528_1_93 | 89796 | 90476 | + | 9.B.20.1.4 |
Gene ID: HRGMv2_3528_1_90
Type: CAZyme
Location: 86919 - 87731 (+)
Type: CAZyme
Location: 86919 - 87731 (+)
Gene ID: HRGMv2_3528_1_91
Type: pfam
Location: 87762 - 87980 (+)
Type: pfam
Location: 87762 - 87980 (+)
Gene ID: HRGMv2_3528_1_92
Type: pfam
Location: 88225 - 89718 (+)
Type: pfam
Location: 88225 - 89718 (+)
Gene ID: HRGMv2_3528_1_93
Type: TC
Location: 89796 - 90476 (+)
Type: TC
Location: 89796 - 90476 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.