Cluster: HRGMv2_3525_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3525
- CGC Family ID: CGCFAM_00916
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3525_3 | HRGMv2_3525_3_25 | 24574 | 26781 | - | 3.A.3.5.15 |
| STP | HRGMv2_3525_3 | HRGMv2_3525_3_26 | 26783 | 26992 | - | HMA |
| NULL(UNKNOWN) | HRGMv2_3525_3 | HRGMv2_3525_3_27 | 27298 | 27888 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3525_3 | HRGMv2_3525_3_28 | 28226 | 28942 | - | CBM50 | GH25 |
Gene ID: HRGMv2_3525_3_25
Type: TC
Location: 24574 - 26781 (-)
Type: TC
Location: 24574 - 26781 (-)
Gene ID: HRGMv2_3525_3_26
Type: STP
Location: 26783 - 26992 (-)
Type: STP
Location: 26783 - 26992 (-)
Gene ID: HRGMv2_3525_3_27
Type:
Location: 27298 - 27888 (+)
Type:
Location: 27298 - 27888 (+)
Gene ID: HRGMv2_3525_3_28
Type: CAZyme
Location: 28226 - 28942 (-)
Type: CAZyme
Location: 28226 - 28942 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-793
Species
CAG-793 sp000433915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.