Cluster: HRGMv2_3519_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3519
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3519_31 | HRGMv2_3519_31_6 | 5106 | 5834 | - | 3.A.1.103.5 |
| pfam | HRGMv2_3519_31 | HRGMv2_3519_31_7 | 5916 | 6875 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| pfam | HRGMv2_3519_31 | HRGMv2_3519_31_8 | 6863 | 7747 | - | NTP_transferase | NTP_transf_3 |
| TC | HRGMv2_3519_31 | HRGMv2_3519_31_9 | 7772 | 8116 | - | 2.A.7.33.5 |
| pfam | HRGMv2_3519_31 | HRGMv2_3519_31_10 | 8109 | 8462 | - | EamA |
| CAZyme | HRGMv2_3519_31 | HRGMv2_3519_31_11 | 8443 | 9414 | - | GT2 |
Gene ID: HRGMv2_3519_31_6
Type: TC
Location: 5106 - 5834 (-)
Type: TC
Location: 5106 - 5834 (-)
Gene ID: HRGMv2_3519_31_7
Type: pfam
Location: 5916 - 6875 (-)
Type: pfam
Location: 5916 - 6875 (-)
Gene ID: HRGMv2_3519_31_8
Type: pfam
Location: 6863 - 7747 (-)
Type: pfam
Location: 6863 - 7747 (-)
Gene ID: HRGMv2_3519_31_9
Type: TC
Location: 7772 - 8116 (-)
Type: TC
Location: 7772 - 8116 (-)
Gene ID: HRGMv2_3519_31_10
Type: pfam
Location: 8109 - 8462 (-)
Type: pfam
Location: 8109 - 8462 (-)
Gene ID: HRGMv2_3519_31_11
Type: CAZyme
Location: 8443 - 9414 (-)
Type: CAZyme
Location: 8443 - 9414 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-452
Species
CAG-452 sp934167165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.