Cluster: HRGMv2_3519_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3519
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3519_1 | HRGMv2_3519_1_58 | 51208 | 52722 | + | 3.A.7.7.1 |
| NULL(UNKNOWN) | HRGMv2_3519_1 | HRGMv2_3519_1_59 | 52773 | 53348 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3519_1 | HRGMv2_3519_1_60 | 53384 | 55195 | - | 2.A.21.9.1 |
| TC | HRGMv2_3519_1 | HRGMv2_3519_1_61 | 55197 | 62618 | - | 4.C.1.1.4 |
| CAZyme | HRGMv2_3519_1 | HRGMv2_3519_1_62 | 62890 | 64089 | + | GT4 |
| peptidase | HRGMv2_3519_1 | HRGMv2_3519_1_63 | 64288 | 65412 | + | S01.UPC |
| CAZyme | HRGMv2_3519_1 | HRGMv2_3519_1_64 | 65480 | 66691 | - | CBM50 |
Gene ID: HRGMv2_3519_1_58
Type: TC
Location: 51208 - 52722 (+)
Type: TC
Location: 51208 - 52722 (+)
Gene ID: HRGMv2_3519_1_59
Type:
Location: 52773 - 53348 (+)
Type:
Location: 52773 - 53348 (+)
Gene ID: HRGMv2_3519_1_60
Type: TC
Location: 53384 - 55195 (-)
Type: TC
Location: 53384 - 55195 (-)
Gene ID: HRGMv2_3519_1_61
Type: TC
Location: 55197 - 62618 (-)
Type: TC
Location: 55197 - 62618 (-)
Gene ID: HRGMv2_3519_1_62
Type: CAZyme
Location: 62890 - 64089 (+)
Type: CAZyme
Location: 62890 - 64089 (+)
Gene ID: HRGMv2_3519_1_63
Type: peptidase
Location: 64288 - 65412 (+)
Type: peptidase
Location: 64288 - 65412 (+)
Gene ID: HRGMv2_3519_1_64
Type: CAZyme
Location: 65480 - 66691 (-)
Type: CAZyme
Location: 65480 - 66691 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-452
Species
CAG-452 sp934167165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.