Cluster: HRGMv2_3517_CGC8
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3517
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_888 | 862131 | 863642 | + | 3.A.7.7.1 |
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_889 | 863688 | 865406 | - | 2.A.21.9.1 |
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_890 | 865548 | 870242 | - | 4.C.1.1.17 |
| pfam | HRGMv2_3517_1 | HRGMv2_3517_1_891 | 870595 | 872994 | - | AMP-binding | Condensation |
| peptidase | HRGMv2_3517_1 | HRGMv2_3517_1_892 | 873220 | 874341 | + | S01.UPC |
| CAZyme | HRGMv2_3517_1 | HRGMv2_3517_1_893 | 874409 | 875683 | - | CBM50 |
| pfam | HRGMv2_3517_1 | HRGMv2_3517_1_894 | 875866 | 876513 | + | DeoC | NanE |
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_895 | 876720 | 878543 | + | 3.A.1.26.10 |
| NULL(UNKNOWN) | HRGMv2_3517_1 | HRGMv2_3517_1_896 | 878536 | 878673 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_897 | 878645 | 879352 | + | 3.A.1.26.7 |
Gene ID: HRGMv2_3517_1_888
Type: TC
Location: 862131 - 863642 (+)
Type: TC
Location: 862131 - 863642 (+)
Gene ID: HRGMv2_3517_1_889
Type: TC
Location: 863688 - 865406 (-)
Type: TC
Location: 863688 - 865406 (-)
Gene ID: HRGMv2_3517_1_890
Type: TC
Location: 865548 - 870242 (-)
Type: TC
Location: 865548 - 870242 (-)
Gene ID: HRGMv2_3517_1_891
Type: pfam
Location: 870595 - 872994 (-)
Type: pfam
Location: 870595 - 872994 (-)
Gene ID: HRGMv2_3517_1_892
Type: peptidase
Location: 873220 - 874341 (+)
Type: peptidase
Location: 873220 - 874341 (+)
Gene ID: HRGMv2_3517_1_893
Type: CAZyme
Location: 874409 - 875683 (-)
Type: CAZyme
Location: 874409 - 875683 (-)
Gene ID: HRGMv2_3517_1_894
Type: pfam
Location: 875866 - 876513 (+)
Type: pfam
Location: 875866 - 876513 (+)
Gene ID: HRGMv2_3517_1_895
Type: TC
Location: 876720 - 878543 (+)
Type: TC
Location: 876720 - 878543 (+)
Gene ID: HRGMv2_3517_1_896
Type:
Location: 878536 - 878673 (+)
Type:
Location: 878536 - 878673 (+)
Gene ID: HRGMv2_3517_1_897
Type: TC
Location: 878645 - 879352 (+)
Type: TC
Location: 878645 - 879352 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-452
Species
CAG-452 sp000434035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.