Cluster: HRGMv2_3517_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3517
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_623 | 603478 | 604350 | - | 2.A.115.1.5 |
| pfam | HRGMv2_3517_1 | HRGMv2_3517_1_624 | 604391 | 605446 | - | Radical_SAM | Radical_SAM_C |
| pfam | HRGMv2_3517_1 | HRGMv2_3517_1_625 | 605439 | 606116 | - | dsrm | Ribonuclease_3 | Ribonucleas_3_3 |
| CAZyme | HRGMv2_3517_1 | HRGMv2_3517_1_626 | 606149 | 607264 | - | GT28 |
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_627 | 607397 | 608062 | - | 2.A.103.1.3 |
| pfam | HRGMv2_3517_1 | HRGMv2_3517_1_628 | 608127 | 608552 | - | FTSW_RODA_SPOVE |
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_629 | 608722 | 609393 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3517_1_623
Type: TC
Location: 603478 - 604350 (-)
Type: TC
Location: 603478 - 604350 (-)
Gene ID: HRGMv2_3517_1_624
Type: pfam
Location: 604391 - 605446 (-)
Type: pfam
Location: 604391 - 605446 (-)
Gene ID: HRGMv2_3517_1_625
Type: pfam
Location: 605439 - 606116 (-)
Type: pfam
Location: 605439 - 606116 (-)
Gene ID: HRGMv2_3517_1_626
Type: CAZyme
Location: 606149 - 607264 (-)
Type: CAZyme
Location: 606149 - 607264 (-)
Gene ID: HRGMv2_3517_1_627
Type: TC
Location: 607397 - 608062 (-)
Type: TC
Location: 607397 - 608062 (-)
Gene ID: HRGMv2_3517_1_628
Type: pfam
Location: 608127 - 608552 (-)
Type: pfam
Location: 608127 - 608552 (-)
Gene ID: HRGMv2_3517_1_629
Type: TC
Location: 608722 - 609393 (-)
Type: TC
Location: 608722 - 609393 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-452
Species
CAG-452 sp000434035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.