Cluster: HRGMv2_3517_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3517
- CGC Family ID: CGCFAM_06227
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3517_1 | HRGMv2_3517_1_287 | 282339 | 284390 | - | GH133 |
| pfam | HRGMv2_3517_1 | HRGMv2_3517_1_288 | 284441 | 286039 | - | CofD |
| pfam | HRGMv2_3517_1 | HRGMv2_3517_1_289 | 286042 | 286950 | - | FAD_binding_4 | MurB_C |
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_290 | 287052 | 287765 | - | 3.A.3.2.21 |
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_291 | 287850 | 288866 | - | 3.A.3.2.21 |
| TC | HRGMv2_3517_1 | HRGMv2_3517_1_292 | 289035 | 289691 | - | 3.A.3.2.21 |
| CAZyme | HRGMv2_3517_1 | HRGMv2_3517_1_293 | 289749 | 290525 | - | CE4 |
Gene ID: HRGMv2_3517_1_287
Type: CAZyme
Location: 282339 - 284390 (-)
Type: CAZyme
Location: 282339 - 284390 (-)
Gene ID: HRGMv2_3517_1_288
Type: pfam
Location: 284441 - 286039 (-)
Type: pfam
Location: 284441 - 286039 (-)
Gene ID: HRGMv2_3517_1_289
Type: pfam
Location: 286042 - 286950 (-)
Type: pfam
Location: 286042 - 286950 (-)
Gene ID: HRGMv2_3517_1_290
Type: TC
Location: 287052 - 287765 (-)
Type: TC
Location: 287052 - 287765 (-)
Gene ID: HRGMv2_3517_1_291
Type: TC
Location: 287850 - 288866 (-)
Type: TC
Location: 287850 - 288866 (-)
Gene ID: HRGMv2_3517_1_292
Type: TC
Location: 289035 - 289691 (-)
Type: TC
Location: 289035 - 289691 (-)
Gene ID: HRGMv2_3517_1_293
Type: CAZyme
Location: 289749 - 290525 (-)
Type: CAZyme
Location: 289749 - 290525 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-452
Species
CAG-452 sp000434035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.