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Cluster: HRGMv2_3517_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3517_1 HRGMv2_3517_1_136 126824 129388 + GT35
pfam HRGMv2_3517_1 HRGMv2_3517_1_137 129655 130611 + LytR_cpsA_psr
TC HRGMv2_3517_1 HRGMv2_3517_1_138 130635 132581 + 9.B.18.2.1
STP HRGMv2_3517_1 HRGMv2_3517_1_139 132599 133729 + Aminotran_1_2
TC HRGMv2_3517_1 HRGMv2_3517_1_140 133773 134339 + 9.B.18.1.2
pfam HRGMv2_3517_1 HRGMv2_3517_1_141 134390 135016 + Hexapep | PglD_N
CAZyme HRGMv2_3517_1 HRGMv2_3517_1_142 135017 136180 + GT2
pfam HRGMv2_3517_1 HRGMv2_3517_1_143 136200 136973 + Glycos_transf_2
CAZyme HRGMv2_3517_1 HRGMv2_3517_1_144 136977 137891 + GT2
Gene ID: HRGMv2_3517_1_136
Type: CAZyme
Location: 126824 - 129388 (+)
Gene ID: HRGMv2_3517_1_137
Type: pfam
Location: 129655 - 130611 (+)
Gene ID: HRGMv2_3517_1_138
Type: TC
Location: 130635 - 132581 (+)
Gene ID: HRGMv2_3517_1_139
Type: STP
Location: 132599 - 133729 (+)
Gene ID: HRGMv2_3517_1_140
Type: TC
Location: 133773 - 134339 (+)
Gene ID: HRGMv2_3517_1_141
Type: pfam
Location: 134390 - 135016 (+)
Gene ID: HRGMv2_3517_1_142
Type: CAZyme
Location: 135017 - 136180 (+)
Gene ID: HRGMv2_3517_1_143
Type: pfam
Location: 136200 - 136973 (+)
Gene ID: HRGMv2_3517_1_144
Type: CAZyme
Location: 136977 - 137891 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-452
→
Species
CAG-452 sp000434035

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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