Cluster: HRGMv2_3510_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3510
- CGC Family ID: CGCFAM_00036
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3510_2 | HRGMv2_3510_2_73 | 77664 | 79736 | - | GT2 |
| TC | HRGMv2_3510_2 | HRGMv2_3510_2_74 | 79776 | 81224 | - | 2.A.66.2.16 |
| pfam | HRGMv2_3510_2 | HRGMv2_3510_2_75 | 81217 | 82317 | - | FAD_binding_2 | Amino_oxidase | GLF | NAD_binding_8 |
| NULL(UNKNOWN) | HRGMv2_3510_2 | HRGMv2_3510_2_76 | 82310 | 83635 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3510_2 | HRGMv2_3510_2_77 | 83686 | 84471 | - | GT111 |
| pfam | HRGMv2_3510_2 | HRGMv2_3510_2_78 | 84676 | 84939 | - | DUF1919 |
| NULL(UNKNOWN) | HRGMv2_3510_2 | HRGMv2_3510_2_79 | 84939 | 85130 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3510_2 | HRGMv2_3510_2_80 | 85123 | 86238 | - | GT4 |
| STP | HRGMv2_3510_2 | HRGMv2_3510_2_81 | 86235 | 87437 | - | Fer4 | Fer4 |
| pfam | HRGMv2_3510_2 | HRGMv2_3510_2_82 | 87451 | 88566 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_3510_2 | HRGMv2_3510_2_83 | 88532 | 89419 | - | GT2 |
| TC | HRGMv2_3510_2 | HRGMv2_3510_2_84 | 89419 | 90138 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_3510_2_73
Type: CAZyme
Location: 77664 - 79736 (-)
Type: CAZyme
Location: 77664 - 79736 (-)
Gene ID: HRGMv2_3510_2_74
Type: TC
Location: 79776 - 81224 (-)
Type: TC
Location: 79776 - 81224 (-)
Gene ID: HRGMv2_3510_2_75
Type: pfam
Location: 81217 - 82317 (-)
Type: pfam
Location: 81217 - 82317 (-)
Gene ID: HRGMv2_3510_2_76
Type:
Location: 82310 - 83635 (-)
Type:
Location: 82310 - 83635 (-)
Gene ID: HRGMv2_3510_2_77
Type: CAZyme
Location: 83686 - 84471 (-)
Type: CAZyme
Location: 83686 - 84471 (-)
Gene ID: HRGMv2_3510_2_78
Type: pfam
Location: 84676 - 84939 (-)
Type: pfam
Location: 84676 - 84939 (-)
Gene ID: HRGMv2_3510_2_79
Type:
Location: 84939 - 85130 (-)
Type:
Location: 84939 - 85130 (-)
Gene ID: HRGMv2_3510_2_80
Type: CAZyme
Location: 85123 - 86238 (-)
Type: CAZyme
Location: 85123 - 86238 (-)
Gene ID: HRGMv2_3510_2_81
Type: STP
Location: 86235 - 87437 (-)
Type: STP
Location: 86235 - 87437 (-)
Gene ID: HRGMv2_3510_2_82
Type: pfam
Location: 87451 - 88566 (-)
Type: pfam
Location: 87451 - 88566 (-)
Gene ID: HRGMv2_3510_2_83
Type: CAZyme
Location: 88532 - 89419 (-)
Type: CAZyme
Location: 88532 - 89419 (-)
Gene ID: HRGMv2_3510_2_84
Type: TC
Location: 89419 - 90138 (-)
Type: TC
Location: 89419 - 90138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp001916055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.