Cluster: HRGMv2_3510_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3510
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3510_2 | HRGMv2_3510_2_12 | 11898 | 14528 | - | GT51 |
| NULL(UNKNOWN) | HRGMv2_3510_2 | HRGMv2_3510_2_13 | 14489 | 14638 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3510_2 | HRGMv2_3510_2_14 | 14613 | 15449 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3510_2 | HRGMv2_3510_2_15 | 15543 | 17246 | - | GH18 |
| TF | HRGMv2_3510_2 | HRGMv2_3510_2_16 | 17337 | 17984 | - | LexA_DNA_bind |
| pfam | HRGMv2_3510_2 | HRGMv2_3510_2_17 | 18064 | 18540 | - | GreA_GreB | GreA_GreB_N |
| TC | HRGMv2_3510_2 | HRGMv2_3510_2_18 | 18697 | 19296 | - | 4.F.1.1.8 |
| TC | HRGMv2_3510_2 | HRGMv2_3510_2_19 | 19335 | 20570 | - | 9.B.174.1.1 |
Gene ID: HRGMv2_3510_2_12
Type: CAZyme
Location: 11898 - 14528 (-)
Type: CAZyme
Location: 11898 - 14528 (-)
Gene ID: HRGMv2_3510_2_13
Type:
Location: 14489 - 14638 (-)
Type:
Location: 14489 - 14638 (-)
Gene ID: HRGMv2_3510_2_14
Type:
Location: 14613 - 15449 (-)
Type:
Location: 14613 - 15449 (-)
Gene ID: HRGMv2_3510_2_15
Type: CAZyme
Location: 15543 - 17246 (-)
Type: CAZyme
Location: 15543 - 17246 (-)
Gene ID: HRGMv2_3510_2_16
Type: TF
Location: 17337 - 17984 (-)
Type: TF
Location: 17337 - 17984 (-)
Gene ID: HRGMv2_3510_2_17
Type: pfam
Location: 18064 - 18540 (-)
Type: pfam
Location: 18064 - 18540 (-)
Gene ID: HRGMv2_3510_2_18
Type: TC
Location: 18697 - 19296 (-)
Type: TC
Location: 18697 - 19296 (-)
Gene ID: HRGMv2_3510_2_19
Type: TC
Location: 19335 - 20570 (-)
Type: TC
Location: 19335 - 20570 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp001916055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.