Cluster: HRGMv2_3510_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3510
- CGC Family ID: CGCFAM_10382
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3510_1 | HRGMv2_3510_1_184 | 179416 | 181008 | + | GH57 |
| pfam | HRGMv2_3510_1 | HRGMv2_3510_1_185 | 181179 | 182042 | + | YtxC |
| TC | HRGMv2_3510_1 | HRGMv2_3510_1_186 | 182076 | 183365 | - | 2.A.23.1.2 |
Gene ID: HRGMv2_3510_1_184
Type: CAZyme
Location: 179416 - 181008 (+)
Type: CAZyme
Location: 179416 - 181008 (+)
Gene ID: HRGMv2_3510_1_185
Type: pfam
Location: 181179 - 182042 (+)
Type: pfam
Location: 181179 - 182042 (+)
Gene ID: HRGMv2_3510_1_186
Type: TC
Location: 182076 - 183365 (-)
Type: TC
Location: 182076 - 183365 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp001916055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3510_1_186 | vegetarian > omnivore | 3.35153 | 0.02604 |