Cluster: HRGMv2_3505_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3505
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3505_30 | HRGMv2_3505_30_1 | 208 | 1947 | + | GT26 |
| STP | HRGMv2_3505_30 | HRGMv2_3505_30_2 | 1940 | 2407 | + | CBS | CBS |
| NULL(UNKNOWN) | HRGMv2_3505_30 | HRGMv2_3505_30_3 | 2404 | 2736 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3505_30 | HRGMv2_3505_30_4 | 2736 | 4631 | + | 3.A.2.2.1 |
| TC | HRGMv2_3505_30 | HRGMv2_3505_30_5 | 4613 | 4831 | + | 3.A.2.2.1 |
Gene ID: HRGMv2_3505_30_1
Type: CAZyme
Location: 208 - 1947 (+)
Type: CAZyme
Location: 208 - 1947 (+)
Gene ID: HRGMv2_3505_30_2
Type: STP
Location: 1940 - 2407 (+)
Type: STP
Location: 1940 - 2407 (+)
Gene ID: HRGMv2_3505_30_3
Type:
Location: 2404 - 2736 (+)
Type:
Location: 2404 - 2736 (+)
Gene ID: HRGMv2_3505_30_4
Type: TC
Location: 2736 - 4631 (+)
Type: TC
Location: 2736 - 4631 (+)
Gene ID: HRGMv2_3505_30_5
Type: TC
Location: 4613 - 4831 (+)
Type: TC
Location: 4613 - 4831 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Species
Pyramidobacter porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.