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Cluster: HRGMv2_3498_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3498_10 HRGMv2_3498_10_1 143 1870 + 3.A.1.123.2
NULL(UNKNOWN) HRGMv2_3498_10 HRGMv2_3498_10_2 2039 2431 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3498_10 HRGMv2_3498_10_3 2428 3537 + GT4
CAZyme HRGMv2_3498_10 HRGMv2_3498_10_4 3558 5726 + GT2
TC HRGMv2_3498_10 HRGMv2_3498_10_5 5946 7178 + 2.A.41.1.3
TC HRGMv2_3498_10 HRGMv2_3498_10_6 7663 8502 + 2.A.115.1.2
TC HRGMv2_3498_10 HRGMv2_3498_10_7 8710 9507 + 3.A.1.14.7
TC HRGMv2_3498_10 HRGMv2_3498_10_8 9542 10546 + 3.A.1.14.7
TC HRGMv2_3498_10 HRGMv2_3498_10_9 10543 11559 + 3.A.1.14.15
Gene ID: HRGMv2_3498_10_1
Type: TC
Location: 143 - 1870 (+)
Gene ID: HRGMv2_3498_10_2
Type:
Location: 2039 - 2431 (+)
Gene ID: HRGMv2_3498_10_3
Type: CAZyme
Location: 2428 - 3537 (+)
Gene ID: HRGMv2_3498_10_4
Type: CAZyme
Location: 3558 - 5726 (+)
Gene ID: HRGMv2_3498_10_5
Type: TC
Location: 5946 - 7178 (+)
Gene ID: HRGMv2_3498_10_6
Type: TC
Location: 7663 - 8502 (+)
Gene ID: HRGMv2_3498_10_7
Type: TC
Location: 8710 - 9507 (+)
Gene ID: HRGMv2_3498_10_8
Type: TC
Location: 9542 - 10546 (+)
Gene ID: HRGMv2_3498_10_9
Type: TC
Location: 10543 - 11559 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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