Cluster: HRGMv2_3498_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3498
- CGC Family ID: CGCFAM_00276
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3498_7 | HRGMv2_3498_7_73 | 66725 | 67027 | + | 4.A.3.2.6 |
| TC | HRGMv2_3498_7 | HRGMv2_3498_7_74 | 67052 | 68347 | + | 4.A.3.2.2 |
| TC | HRGMv2_3498_7 | HRGMv2_3498_7_75 | 68363 | 68680 | + | 4.A.3.2.2 |
| NULL(UNKNOWN) | HRGMv2_3498_7 | HRGMv2_3498_7_76 | 68687 | 68974 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3498_7 | HRGMv2_3498_7_77 | 68975 | 70063 | + | GH170 |
Gene ID: HRGMv2_3498_7_73
Type: TC
Location: 66725 - 67027 (+)
Type: TC
Location: 66725 - 67027 (+)
Gene ID: HRGMv2_3498_7_74
Type: TC
Location: 67052 - 68347 (+)
Type: TC
Location: 67052 - 68347 (+)
Gene ID: HRGMv2_3498_7_75
Type: TC
Location: 68363 - 68680 (+)
Type: TC
Location: 68363 - 68680 (+)
Gene ID: HRGMv2_3498_7_76
Type:
Location: 68687 - 68974 (+)
Type:
Location: 68687 - 68974 (+)
Gene ID: HRGMv2_3498_7_77
Type: CAZyme
Location: 68975 - 70063 (+)
Type: CAZyme
Location: 68975 - 70063 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Staphylococcaceae
Genus
Staphylococcus
Species
Staphylococcus haemolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.