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Cluster: HRGMv2_3498_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3498_6 HRGMv2_3498_6_32 31473 32855 - 2.A.1.3.59
peptidase HRGMv2_3498_6 HRGMv2_3498_6_33 32868 34043 - M20.UPD
CAZyme HRGMv2_3498_6 HRGMv2_3498_6_34 34190 36454 - GH39
CAZyme HRGMv2_3498_6 HRGMv2_3498_6_35 36756 38462 - AA3_2
sulfatase HRGMv2_3498_6 HRGMv2_3498_6_36 38604 40094 - S1_6
TF HRGMv2_3498_6 HRGMv2_3498_6_37 40357 40911 + 0040266
TC HRGMv2_3498_6 HRGMv2_3498_6_38 40971 42596 - 2.A.15.2.3
TC HRGMv2_3498_6 HRGMv2_3498_6_39 42960 44252 - 2.A.13.1.1
NULL(UNKNOWN) HRGMv2_3498_6 HRGMv2_3498_6_40 44476 44742 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3498_6 HRGMv2_3498_6_41 44923 45714 - 3.A.7.14.1
TC HRGMv2_3498_6 HRGMv2_3498_6_42 46234 47604 - 2.A.11.1.2
sulfatase HRGMv2_3498_6 HRGMv2_3498_6_43 47750 48349 - S1_11
pfam HRGMv2_3498_6 HRGMv2_3498_6_44 48366 49544 - ATP-sulfurylase | PUA_2
TC HRGMv2_3498_6 HRGMv2_3498_6_45 49596 50465 - 2.A.102.4.8
Gene ID: HRGMv2_3498_6_32
Type: TC
Location: 31473 - 32855 (-)
Gene ID: HRGMv2_3498_6_33
Type: peptidase
Location: 32868 - 34043 (-)
Gene ID: HRGMv2_3498_6_34
Type: CAZyme
Location: 34190 - 36454 (-)
Gene ID: HRGMv2_3498_6_35
Type: CAZyme
Location: 36756 - 38462 (-)
Gene ID: HRGMv2_3498_6_36
Type: sulfatase
Location: 38604 - 40094 (-)
Gene ID: HRGMv2_3498_6_37
Type: TF
Location: 40357 - 40911 (+)
Gene ID: HRGMv2_3498_6_38
Type: TC
Location: 40971 - 42596 (-)
Gene ID: HRGMv2_3498_6_39
Type: TC
Location: 42960 - 44252 (-)
Gene ID: HRGMv2_3498_6_40
Type:
Location: 44476 - 44742 (-)
Gene ID: HRGMv2_3498_6_41
Type: TC
Location: 44923 - 45714 (-)
Gene ID: HRGMv2_3498_6_42
Type: TC
Location: 46234 - 47604 (-)
Gene ID: HRGMv2_3498_6_43
Type: sulfatase
Location: 47750 - 48349 (-)
Gene ID: HRGMv2_3498_6_44
Type: pfam
Location: 48366 - 49544 (-)
Gene ID: HRGMv2_3498_6_45
Type: TC
Location: 49596 - 50465 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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