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Cluster: HRGMv2_3498_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3498_35 HRGMv2_3498_35_5 4994 5323 + 2.A.7.1.5
TC HRGMv2_3498_35 HRGMv2_3498_35_6 5325 5636 + 2.A.7.1.5
pfam HRGMv2_3498_35 HRGMv2_3498_35_7 5718 6674 + 2-Hacid_dh | 2-Hacid_dh_C
pfam HRGMv2_3498_35 HRGMv2_3498_35_8 6769 7893 - FAD_binding_3 | NAD_binding_8
CAZyme HRGMv2_3498_35 HRGMv2_3498_35_9 7989 8768 - GH73
pfam HRGMv2_3498_35 HRGMv2_3498_35_10 9293 9766 - DUF1641
TC HRGMv2_3498_35 HRGMv2_3498_35_11 9766 12720 - 3.D.1.9.2
Gene ID: HRGMv2_3498_35_5
Type: TC
Location: 4994 - 5323 (+)
Gene ID: HRGMv2_3498_35_6
Type: TC
Location: 5325 - 5636 (+)
Gene ID: HRGMv2_3498_35_7
Type: pfam
Location: 5718 - 6674 (+)
Gene ID: HRGMv2_3498_35_8
Type: pfam
Location: 6769 - 7893 (-)
Gene ID: HRGMv2_3498_35_9
Type: CAZyme
Location: 7989 - 8768 (-)
Gene ID: HRGMv2_3498_35_10
Type: pfam
Location: 9293 - 9766 (-)
Gene ID: HRGMv2_3498_35_11
Type: TC
Location: 9766 - 12720 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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