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Cluster: HRGMv2_3498_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3498_27 HRGMv2_3498_27_8 10077 11252 + GT28
TC HRGMv2_3498_27 HRGMv2_3498_27_9 11230 12426 + 2.A.1.2.44
pfam HRGMv2_3498_27 HRGMv2_3498_27_10 12515 13024 - LigT_PEase | 2_5_RNA_ligase2
peptidase HRGMv2_3498_27 HRGMv2_3498_27_11 13205 13969 - S09.B07
TC HRGMv2_3498_27 HRGMv2_3498_27_12 14256 15341 + 2.A.86.1.8
pfam HRGMv2_3498_27 HRGMv2_3498_27_13 15465 16235 - adh_short | adh_short_C2
STP HRGMv2_3498_27 HRGMv2_3498_27_14 16561 18405 - TrkA_C
TC HRGMv2_3498_27 HRGMv2_3498_27_15 18415 19800 - 1.A.26.1.1
Gene ID: HRGMv2_3498_27_8
Type: CAZyme
Location: 10077 - 11252 (+)
Gene ID: HRGMv2_3498_27_9
Type: TC
Location: 11230 - 12426 (+)
Gene ID: HRGMv2_3498_27_10
Type: pfam
Location: 12515 - 13024 (-)
Gene ID: HRGMv2_3498_27_11
Type: peptidase
Location: 13205 - 13969 (-)
Gene ID: HRGMv2_3498_27_12
Type: TC
Location: 14256 - 15341 (+)
Gene ID: HRGMv2_3498_27_13
Type: pfam
Location: 15465 - 16235 (-)
Gene ID: HRGMv2_3498_27_14
Type: STP
Location: 16561 - 18405 (-)
Gene ID: HRGMv2_3498_27_15
Type: TC
Location: 18415 - 19800 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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