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Cluster: HRGMv2_3497_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3497_4 HRGMv2_3497_4_6 3581 5983 + 2.A.63.1.2
TC HRGMv2_3497_4 HRGMv2_3497_4_7 5970 6395 + 2.A.63.1.2
TC HRGMv2_3497_4 HRGMv2_3497_4_8 6392 6736 + 2.A.63.1.2
TC HRGMv2_3497_4 HRGMv2_3497_4_9 6723 8225 + 2.A.63.1.3
TC HRGMv2_3497_4 HRGMv2_3497_4_10 8226 8708 + 2.A.63.1.2
pfam HRGMv2_3497_4 HRGMv2_3497_4_11 8705 9007 + MrpF_PhaF
TC HRGMv2_3497_4 HRGMv2_3497_4_12 8982 9437 + 2.A.63.1.4
TC HRGMv2_3497_4 HRGMv2_3497_4_13 9972 12014 + 2.A.36.3.2
TC HRGMv2_3497_4 HRGMv2_3497_4_14 12617 13546 - 3.A.1.15.15
TC HRGMv2_3497_4 HRGMv2_3497_4_15 13547 14380 - 3.A.1.15.15
TC HRGMv2_3497_4 HRGMv2_3497_4_16 14383 15123 - 3.A.1.15.15
TF HRGMv2_3497_4 HRGMv2_3497_4_17 15245 15889 + Fe_dep_repress
pfam HRGMv2_3497_4 HRGMv2_3497_4_18 16023 16769 - Peptidase_M50B
CAZyme HRGMv2_3497_4 HRGMv2_3497_4_19 17045 17794 + GT26
TC HRGMv2_3497_4 HRGMv2_3497_4_20 17874 18668 - 3.A.1.104.2
TC HRGMv2_3497_4 HRGMv2_3497_4_21 19148 19960 + 3.A.1.104.2
pfam HRGMv2_3497_4 HRGMv2_3497_4_22 20125 21219 + Glyphos_transf
CAZyme HRGMv2_3497_4 HRGMv2_3497_4_23 21216 22280 + GT2
pfam HRGMv2_3497_4 HRGMv2_3497_4_24 22411 22809 + CTP_transf_like
peptidase HRGMv2_3497_4 HRGMv2_3497_4_25 22888 24177 - S11.010
TC HRGMv2_3497_4 HRGMv2_3497_4_26 24371 26098 + 3.A.1.123.2
TC HRGMv2_3497_4 HRGMv2_3497_4_27 26335 27564 + 2.A.41.1.3
TC HRGMv2_3497_4 HRGMv2_3497_4_28 28062 28895 + 2.A.115.1.2
TC HRGMv2_3497_4 HRGMv2_3497_4_29 29128 29928 + 3.A.1.14.7
TC HRGMv2_3497_4 HRGMv2_3497_4_30 29971 30975 + 3.A.1.14.7
TC HRGMv2_3497_4 HRGMv2_3497_4_31 30972 31988 + 3.A.1.14.15
Gene ID: HRGMv2_3497_4_6
Type: TC
Location: 3581 - 5983 (+)
Gene ID: HRGMv2_3497_4_7
Type: TC
Location: 5970 - 6395 (+)
Gene ID: HRGMv2_3497_4_8
Type: TC
Location: 6392 - 6736 (+)
Gene ID: HRGMv2_3497_4_9
Type: TC
Location: 6723 - 8225 (+)
Gene ID: HRGMv2_3497_4_10
Type: TC
Location: 8226 - 8708 (+)
Gene ID: HRGMv2_3497_4_11
Type: pfam
Location: 8705 - 9007 (+)
Gene ID: HRGMv2_3497_4_12
Type: TC
Location: 8982 - 9437 (+)
Gene ID: HRGMv2_3497_4_13
Type: TC
Location: 9972 - 12014 (+)
Gene ID: HRGMv2_3497_4_14
Type: TC
Location: 12617 - 13546 (-)
Gene ID: HRGMv2_3497_4_15
Type: TC
Location: 13547 - 14380 (-)
Gene ID: HRGMv2_3497_4_16
Type: TC
Location: 14383 - 15123 (-)
Gene ID: HRGMv2_3497_4_17
Type: TF
Location: 15245 - 15889 (+)
Gene ID: HRGMv2_3497_4_18
Type: pfam
Location: 16023 - 16769 (-)
Gene ID: HRGMv2_3497_4_19
Type: CAZyme
Location: 17045 - 17794 (+)
Gene ID: HRGMv2_3497_4_20
Type: TC
Location: 17874 - 18668 (-)
Gene ID: HRGMv2_3497_4_21
Type: TC
Location: 19148 - 19960 (+)
Gene ID: HRGMv2_3497_4_22
Type: pfam
Location: 20125 - 21219 (+)
Gene ID: HRGMv2_3497_4_23
Type: CAZyme
Location: 21216 - 22280 (+)
Gene ID: HRGMv2_3497_4_24
Type: pfam
Location: 22411 - 22809 (+)
Gene ID: HRGMv2_3497_4_25
Type: peptidase
Location: 22888 - 24177 (-)
Gene ID: HRGMv2_3497_4_26
Type: TC
Location: 24371 - 26098 (+)
Gene ID: HRGMv2_3497_4_27
Type: TC
Location: 26335 - 27564 (+)
Gene ID: HRGMv2_3497_4_28
Type: TC
Location: 28062 - 28895 (+)
Gene ID: HRGMv2_3497_4_29
Type: TC
Location: 29128 - 29928 (+)
Gene ID: HRGMv2_3497_4_30
Type: TC
Location: 29971 - 30975 (+)
Gene ID: HRGMv2_3497_4_31
Type: TC
Location: 30972 - 31988 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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