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Cluster: HRGMv2_3497_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3497_3 HRGMv2_3497_3_120 123466 124905 - GH1
pfam HRGMv2_3497_3 HRGMv2_3497_3_121 125026 126525 - DAO | Mqo
pfam HRGMv2_3497_3 HRGMv2_3497_3_122 126798 127622 - Kinase-PPPase
TC HRGMv2_3497_3 HRGMv2_3497_3_123 127624 130254 - 8.A.7.1.5
TC HRGMv2_3497_3 HRGMv2_3497_3_124 130492 132081 - 4.C.1.1.4
pfam HRGMv2_3497_3 HRGMv2_3497_3_125 132239 132712 - ABM
pfam HRGMv2_3497_3 HRGMv2_3497_3_126 132748 132957 - YozE_SAM_like
TC HRGMv2_3497_3 HRGMv2_3497_3_127 133098 134486 - 2.A.1.3.23
peptidase HRGMv2_3497_3 HRGMv2_3497_3_128 134504 135679 - M20.UPD
CAZyme HRGMv2_3497_3 HRGMv2_3497_3_129 135826 137535 - AA3_2
sulfatase HRGMv2_3497_3 HRGMv2_3497_3_130 137671 139161 - S1_6
TF HRGMv2_3497_3 HRGMv2_3497_3_131 139635 140189 + 0040266
TC HRGMv2_3497_3 HRGMv2_3497_3_132 140229 141851 - 2.A.15.2.3
TC HRGMv2_3497_3 HRGMv2_3497_3_133 142225 143517 - 2.A.13.1.1
Gene ID: HRGMv2_3497_3_120
Type: CAZyme
Location: 123466 - 124905 (-)
Gene ID: HRGMv2_3497_3_121
Type: pfam
Location: 125026 - 126525 (-)
Gene ID: HRGMv2_3497_3_122
Type: pfam
Location: 126798 - 127622 (-)
Gene ID: HRGMv2_3497_3_123
Type: TC
Location: 127624 - 130254 (-)
Gene ID: HRGMv2_3497_3_124
Type: TC
Location: 130492 - 132081 (-)
Gene ID: HRGMv2_3497_3_125
Type: pfam
Location: 132239 - 132712 (-)
Gene ID: HRGMv2_3497_3_126
Type: pfam
Location: 132748 - 132957 (-)
Gene ID: HRGMv2_3497_3_127
Type: TC
Location: 133098 - 134486 (-)
Gene ID: HRGMv2_3497_3_128
Type: peptidase
Location: 134504 - 135679 (-)
Gene ID: HRGMv2_3497_3_129
Type: CAZyme
Location: 135826 - 137535 (-)
Gene ID: HRGMv2_3497_3_130
Type: sulfatase
Location: 137671 - 139161 (-)
Gene ID: HRGMv2_3497_3_131
Type: TF
Location: 139635 - 140189 (+)
Gene ID: HRGMv2_3497_3_132
Type: TC
Location: 140229 - 141851 (-)
Gene ID: HRGMv2_3497_3_133
Type: TC
Location: 142225 - 143517 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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