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Cluster: HRGMv2_3497_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3497_1 HRGMv2_3497_1_199 177650 178795 + GT4
TC HRGMv2_3497_1 HRGMv2_3497_1_200 178882 180483 - 2.A.14.1.1
pfam HRGMv2_3497_1 HRGMv2_3497_1_201 180824 182506 + Glyphos_transf
NULL(UNKNOWN) HRGMv2_3497_1 HRGMv2_3497_1_202 182591 183334 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3497_1 HRGMv2_3497_1_203 183499 185661 - GT2
pfam HRGMv2_3497_1 HRGMv2_3497_1_204 185813 186325 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_3497_1 HRGMv2_3497_1_205 186572 186790 + 2.A.64.3.2
TC HRGMv2_3497_1 HRGMv2_3497_1_206 186729 187508 + 2.A.64.3.2
TC HRGMv2_3497_1 HRGMv2_3497_1_207 187531 189243 - 2.A.108.2.5
TC HRGMv2_3497_1 HRGMv2_3497_1_208 189224 190450 - 2.A.108.2.3
TC HRGMv2_3497_1 HRGMv2_3497_1_209 190447 191301 - 2.A.108.2.3
Gene ID: HRGMv2_3497_1_199
Type: CAZyme
Location: 177650 - 178795 (+)
Gene ID: HRGMv2_3497_1_200
Type: TC
Location: 178882 - 180483 (-)
Gene ID: HRGMv2_3497_1_201
Type: pfam
Location: 180824 - 182506 (+)
Gene ID: HRGMv2_3497_1_202
Type:
Location: 182591 - 183334 (-)
Gene ID: HRGMv2_3497_1_203
Type: CAZyme
Location: 183499 - 185661 (-)
Gene ID: HRGMv2_3497_1_204
Type: pfam
Location: 185813 - 186325 (-)
Gene ID: HRGMv2_3497_1_205
Type: TC
Location: 186572 - 186790 (+)
Gene ID: HRGMv2_3497_1_206
Type: TC
Location: 186729 - 187508 (+)
Gene ID: HRGMv2_3497_1_207
Type: TC
Location: 187531 - 189243 (-)
Gene ID: HRGMv2_3497_1_208
Type: TC
Location: 189224 - 190450 (-)
Gene ID: HRGMv2_3497_1_209
Type: TC
Location: 190447 - 191301 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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