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Cluster: HRGMv2_3497_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3497_1 HRGMv2_3497_1_128 107839 108171 + 2.A.7.1.5
TC HRGMv2_3497_1 HRGMv2_3497_1_129 108171 108485 + 2.A.7.1.5
pfam HRGMv2_3497_1 HRGMv2_3497_1_130 108565 109527 + 2-Hacid_dh | 2-Hacid_dh_C
pfam HRGMv2_3497_1 HRGMv2_3497_1_131 109583 110707 - FAD_binding_3 | NAD_binding_8
CAZyme HRGMv2_3497_1 HRGMv2_3497_1_132 110851 111627 - GH73
NULL(UNKNOWN) HRGMv2_3497_1 HRGMv2_3497_1_133 111650 111898 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3497_1 HRGMv2_3497_1_134 112070 112540 - DUF1641
TC HRGMv2_3497_1 HRGMv2_3497_1_135 112540 115494 - 3.D.1.9.2
Gene ID: HRGMv2_3497_1_128
Type: TC
Location: 107839 - 108171 (+)
Gene ID: HRGMv2_3497_1_129
Type: TC
Location: 108171 - 108485 (+)
Gene ID: HRGMv2_3497_1_130
Type: pfam
Location: 108565 - 109527 (+)
Gene ID: HRGMv2_3497_1_131
Type: pfam
Location: 109583 - 110707 (-)
Gene ID: HRGMv2_3497_1_132
Type: CAZyme
Location: 110851 - 111627 (-)
Gene ID: HRGMv2_3497_1_133
Type:
Location: 111650 - 111898 (-)
Gene ID: HRGMv2_3497_1_134
Type: pfam
Location: 112070 - 112540 (-)
Gene ID: HRGMv2_3497_1_135
Type: TC
Location: 112540 - 115494 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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