Cluster: HRGMv2_3497_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3497
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3497_11 | HRGMv2_3497_11_60 | 55666 | 56340 | + | 3.A.1.105.7 |
| NULL(UNKNOWN) | HRGMv2_3497_11 | HRGMv2_3497_11_61 | 56365 | 57288 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3497_11 | HRGMv2_3497_11_62 | 57465 | 58007 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3497_11 | HRGMv2_3497_11_63 | 58121 | 61147 | - | GT4 |
Gene ID: HRGMv2_3497_11_60
Type: TC
Location: 55666 - 56340 (+)
Type: TC
Location: 55666 - 56340 (+)
Gene ID: HRGMv2_3497_11_61
Type:
Location: 56365 - 57288 (+)
Type:
Location: 56365 - 57288 (+)
Gene ID: HRGMv2_3497_11_62
Type:
Location: 57465 - 58007 (-)
Type:
Location: 57465 - 58007 (-)
Gene ID: HRGMv2_3497_11_63
Type: CAZyme
Location: 58121 - 61147 (-)
Type: CAZyme
Location: 58121 - 61147 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Staphylococcaceae
Genus
Staphylococcus
Species
Staphylococcus warneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.