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Cluster: HRGMv2_3497_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3497_4 HRGMv2_3497_4_128 127514 128008 - 2.A.79.1.7
TC HRGMv2_3497_4 HRGMv2_3497_4_129 128024 128785 - 2.A.79.1.4
TC HRGMv2_3497_4 HRGMv2_3497_4_130 129076 130146 - 9.B.34.1.2
TC HRGMv2_3497_4 HRGMv2_3497_4_131 130599 131684 + 9.B.146.1.4
pfam HRGMv2_3497_4 HRGMv2_3497_4_132 131759 132400 - UPF0029 | DUF1949
pfam HRGMv2_3497_4 HRGMv2_3497_4_133 132540 133406 + DegV
TC HRGMv2_3497_4 HRGMv2_3497_4_134 133429 134766 + 3.A.11.1.1
TC HRGMv2_3497_4 HRGMv2_3497_4_135 134766 135440 + 3.A.11.1.4
pfam HRGMv2_3497_4 HRGMv2_3497_4_136 135502 136077 + Ribosomal_S30AE | Ribosom_S30AE_C
TC HRGMv2_3497_4 HRGMv2_3497_4_137 136650 139184 + 3.A.5.1.1
pfam HRGMv2_3497_4 HRGMv2_3497_4_138 139582 140574 + RF-1 | PCRF
CAZyme HRGMv2_3497_4 HRGMv2_3497_4_139 140954 141757 + CBM50
Gene ID: HRGMv2_3497_4_128
Type: TC
Location: 127514 - 128008 (-)
Gene ID: HRGMv2_3497_4_129
Type: TC
Location: 128024 - 128785 (-)
Gene ID: HRGMv2_3497_4_130
Type: TC
Location: 129076 - 130146 (-)
Gene ID: HRGMv2_3497_4_131
Type: TC
Location: 130599 - 131684 (+)
Gene ID: HRGMv2_3497_4_132
Type: pfam
Location: 131759 - 132400 (-)
Gene ID: HRGMv2_3497_4_133
Type: pfam
Location: 132540 - 133406 (+)
Gene ID: HRGMv2_3497_4_134
Type: TC
Location: 133429 - 134766 (+)
Gene ID: HRGMv2_3497_4_135
Type: TC
Location: 134766 - 135440 (+)
Gene ID: HRGMv2_3497_4_136
Type: pfam
Location: 135502 - 136077 (+)
Gene ID: HRGMv2_3497_4_137
Type: TC
Location: 136650 - 139184 (+)
Gene ID: HRGMv2_3497_4_138
Type: pfam
Location: 139582 - 140574 (+)
Gene ID: HRGMv2_3497_4_139
Type: CAZyme
Location: 140954 - 141757 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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