Cluster: HRGMv2_3484_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3484
- CGC Family ID: CGCFAM_07435
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3484_2 | HRGMv2_3484_2_330 | 376800 | 377819 | + | GH177 |
| TC | HRGMv2_3484_2 | HRGMv2_3484_2_331 | 377977 | 379368 | + | 2.A.2.3.5 |
| TF | HRGMv2_3484_2 | HRGMv2_3484_2_332 | 379487 | 380326 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_3484_2 | HRGMv2_3484_2_333 | 380637 | 381662 | - | GH177 |
| TF | HRGMv2_3484_2 | HRGMv2_3484_2_334 | 382001 | 382555 | + | HTH_3 |
| TC | HRGMv2_3484_2 | HRGMv2_3484_2_335 | 382841 | 383929 | + | 2.A.3.3.22 |
Gene ID: HRGMv2_3484_2_330
Type: CAZyme
Location: 376800 - 377819 (+)
Type: CAZyme
Location: 376800 - 377819 (+)
Gene ID: HRGMv2_3484_2_331
Type: TC
Location: 377977 - 379368 (+)
Type: TC
Location: 377977 - 379368 (+)
Gene ID: HRGMv2_3484_2_332
Type: TF
Location: 379487 - 380326 (-)
Type: TF
Location: 379487 - 380326 (-)
Gene ID: HRGMv2_3484_2_333
Type: CAZyme
Location: 380637 - 381662 (-)
Type: CAZyme
Location: 380637 - 381662 (-)
Gene ID: HRGMv2_3484_2_334
Type: TF
Location: 382001 - 382555 (+)
Type: TF
Location: 382001 - 382555 (+)
Gene ID: HRGMv2_3484_2_335
Type: TC
Location: 382841 - 383929 (+)
Type: TC
Location: 382841 - 383929 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Mitsuokella
Species
Mitsuokella multacida
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.