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Cluster: HRGMv2_3484_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3484_2 HRGMv2_3484_2_161 187360 188712 + 2.A.38.1.1
TC HRGMv2_3484_2 HRGMv2_3484_2_162 188714 190189 + 2.A.38.1.3
TC HRGMv2_3484_2 HRGMv2_3484_2_163 190223 191674 + 2.A.38.1.3
pfam HRGMv2_3484_2 HRGMv2_3484_2_164 192526 193467 + Mem_trans
TF HRGMv2_3484_2 HRGMv2_3484_2_165 193558 194352 + HTH_6
TC HRGMv2_3484_2 HRGMv2_3484_2_166 194626 196746 + 4.A.1.1.16
CAZyme HRGMv2_3484_2 HRGMv2_3484_2_167 196840 198504 + GH13_31
pfam HRGMv2_3484_2 HRGMv2_3484_2_168 198517 199293 + Hydrolase_3
TC HRGMv2_3484_2 HRGMv2_3484_2_169 199557 201110 + 1.B.23.1.18
CAZyme HRGMv2_3484_2 HRGMv2_3484_2_170 201280 204762 + GH13_39
sulfatase HRGMv2_3484_2 HRGMv2_3484_2_171 204939 206531 + S1_23
TC HRGMv2_3484_2 HRGMv2_3484_2_172 206603 207445 - 3.A.1.24.5
TC HRGMv2_3484_2 HRGMv2_3484_2_173 207462 208115 - 3.A.1.24.5
TC HRGMv2_3484_2 HRGMv2_3484_2_174 208084 209145 - 3.A.1.24.1
Gene ID: HRGMv2_3484_2_161
Type: TC
Location: 187360 - 188712 (+)
Gene ID: HRGMv2_3484_2_162
Type: TC
Location: 188714 - 190189 (+)
Gene ID: HRGMv2_3484_2_163
Type: TC
Location: 190223 - 191674 (+)
Gene ID: HRGMv2_3484_2_164
Type: pfam
Location: 192526 - 193467 (+)
Gene ID: HRGMv2_3484_2_165
Type: TF
Location: 193558 - 194352 (+)
Gene ID: HRGMv2_3484_2_166
Type: TC
Location: 194626 - 196746 (+)
Gene ID: HRGMv2_3484_2_167
Type: CAZyme
Location: 196840 - 198504 (+)
Gene ID: HRGMv2_3484_2_168
Type: pfam
Location: 198517 - 199293 (+)
Gene ID: HRGMv2_3484_2_169
Type: TC
Location: 199557 - 201110 (+)
Gene ID: HRGMv2_3484_2_170
Type: CAZyme
Location: 201280 - 204762 (+)
Gene ID: HRGMv2_3484_2_171
Type: sulfatase
Location: 204939 - 206531 (+)
Gene ID: HRGMv2_3484_2_172
Type: TC
Location: 206603 - 207445 (-)
Gene ID: HRGMv2_3484_2_173
Type: TC
Location: 207462 - 208115 (-)
Gene ID: HRGMv2_3484_2_174
Type: TC
Location: 208084 - 209145 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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