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Cluster: HRGMv2_3484_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3484_12 HRGMv2_3484_12_329 365715 366221 + 3.D.1.1.1
TC HRGMv2_3484_12 HRGMv2_3484_12_330 366240 367490 + 3.D.1.5.1
TC HRGMv2_3484_12 HRGMv2_3484_12_331 367487 369256 + 3.D.1.6.1
pfam HRGMv2_3484_12 HRGMv2_3484_12_332 369627 370631 + tRNA-synt_1b
TC HRGMv2_3484_12 HRGMv2_3484_12_333 370732 371598 - 3.D.10.1.4
pfam HRGMv2_3484_12 HRGMv2_3484_12_334 371602 372546 - Fer4_7 | Fer2_3 | Fer4_8 | Fer4_9 | Fer4_17
TC HRGMv2_3484_12 HRGMv2_3484_12_335 372549 374399 - 3.D.10.1.4
TF HRGMv2_3484_12 HRGMv2_3484_12_336 374606 375514 - HTH_1
pfam HRGMv2_3484_12 HRGMv2_3484_12_337 375555 376649 - Asparaginase | Asparaginase_C
TC HRGMv2_3484_12 HRGMv2_3484_12_338 376715 377674 - 2.A.28.2.4
TF HRGMv2_3484_12 HRGMv2_3484_12_339 377913 378809 + HTH_AraC
NULL(UNKNOWN) HRGMv2_3484_12 HRGMv2_3484_12_340 378841 379485 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3484_12 HRGMv2_3484_12_341 379651 381891 - GH36
pfam HRGMv2_3484_12 HRGMv2_3484_12_342 382015 382887 - Hydrolase_3
pfam HRGMv2_3484_12 HRGMv2_3484_12_343 382939 383316 - YgbA_NO
TC HRGMv2_3484_12 HRGMv2_3484_12_344 383512 384834 - 2.A.26.1.1
Gene ID: HRGMv2_3484_12_329
Type: TC
Location: 365715 - 366221 (+)
Gene ID: HRGMv2_3484_12_330
Type: TC
Location: 366240 - 367490 (+)
Gene ID: HRGMv2_3484_12_331
Type: TC
Location: 367487 - 369256 (+)
Gene ID: HRGMv2_3484_12_332
Type: pfam
Location: 369627 - 370631 (+)
Gene ID: HRGMv2_3484_12_333
Type: TC
Location: 370732 - 371598 (-)
Gene ID: HRGMv2_3484_12_334
Type: pfam
Location: 371602 - 372546 (-)
Gene ID: HRGMv2_3484_12_335
Type: TC
Location: 372549 - 374399 (-)
Gene ID: HRGMv2_3484_12_336
Type: TF
Location: 374606 - 375514 (-)
Gene ID: HRGMv2_3484_12_337
Type: pfam
Location: 375555 - 376649 (-)
Gene ID: HRGMv2_3484_12_338
Type: TC
Location: 376715 - 377674 (-)
Gene ID: HRGMv2_3484_12_339
Type: TF
Location: 377913 - 378809 (+)
Gene ID: HRGMv2_3484_12_340
Type:
Location: 378841 - 379485 (-)
Gene ID: HRGMv2_3484_12_341
Type: CAZyme
Location: 379651 - 381891 (-)
Gene ID: HRGMv2_3484_12_342
Type: pfam
Location: 382015 - 382887 (-)
Gene ID: HRGMv2_3484_12_343
Type: pfam
Location: 382939 - 383316 (-)
Gene ID: HRGMv2_3484_12_344
Type: TC
Location: 383512 - 384834 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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