dbCAN Logo

Cluster: HRGMv2_3484_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3484_7 HRGMv2_3484_7_6 6178 7377 + 2.A.41.1.3
STP HRGMv2_3484_7 HRGMv2_3484_7_7 8227 10122 + AAA
TF HRGMv2_3484_7 HRGMv2_3484_7_8 10119 10958 + HTH_6
TC HRGMv2_3484_7 HRGMv2_3484_7_9 11214 12560 + 4.A.3.2.8
TC HRGMv2_3484_7 HRGMv2_3484_7_10 12624 14111 + 1.B.23.1.3
TC HRGMv2_3484_7 HRGMv2_3484_7_11 14162 14464 + 4.A.3.2.6
TC HRGMv2_3484_7 HRGMv2_3484_7_12 14478 14804 + 4.A.3.2.8
CAZyme HRGMv2_3484_7 HRGMv2_3484_7_13 14826 16241 + GH1
CAZyme HRGMv2_3484_7 HRGMv2_3484_7_14 16323 17105 + GH16_21
CAZyme HRGMv2_3484_7 HRGMv2_3484_7_15 17116 18915 + GH9
Gene ID: HRGMv2_3484_7_6
Type: TC
Location: 6178 - 7377 (+)
Gene ID: HRGMv2_3484_7_7
Type: STP
Location: 8227 - 10122 (+)
Gene ID: HRGMv2_3484_7_8
Type: TF
Location: 10119 - 10958 (+)
Gene ID: HRGMv2_3484_7_9
Type: TC
Location: 11214 - 12560 (+)
Gene ID: HRGMv2_3484_7_10
Type: TC
Location: 12624 - 14111 (+)
Gene ID: HRGMv2_3484_7_11
Type: TC
Location: 14162 - 14464 (+)
Gene ID: HRGMv2_3484_7_12
Type: TC
Location: 14478 - 14804 (+)
Gene ID: HRGMv2_3484_7_13
Type: CAZyme
Location: 14826 - 16241 (+)
Gene ID: HRGMv2_3484_7_14
Type: CAZyme
Location: 16323 - 17105 (+)
Gene ID: HRGMv2_3484_7_15
Type: CAZyme
Location: 17116 - 18915 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List