Cluster: HRGMv2_3484_CGC12
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3484
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3484_6 | HRGMv2_3484_6_179 | 188042 | 189073 | - | GT113 |
| pfam | HRGMv2_3484_6 | HRGMv2_3484_6_180 | 189102 | 190241 | - | EpsG |
| CAZyme | HRGMv2_3484_6 | HRGMv2_3484_6_181 | 190268 | 191389 | - | GT4 |
| CAZyme | HRGMv2_3484_6 | HRGMv2_3484_6_182 | 191406 | 192527 | - | GT4 |
| pfam | HRGMv2_3484_6 | HRGMv2_3484_6_183 | 192547 | 193893 | - | Wzz | GNVR |
| CAZyme | HRGMv2_3484_6 | HRGMv2_3484_6_184 | 193943 | 194743 | - | GT111 |
| NULL(UNKNOWN) | HRGMv2_3484_6 | HRGMv2_3484_6_185 | 194760 | 195464 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3484_6 | HRGMv2_3484_6_186 | 195466 | 196734 | - | DUF2813 | AAA_15 | AAA_15 | AAA_21 | AAA_23 |
| TC | HRGMv2_3484_6 | HRGMv2_3484_6_187 | 196759 | 198213 | - | 9.B.18.1.2 |
| TC | HRGMv2_3484_6 | HRGMv2_3484_6_188 | 198261 | 199121 | - | 1.B.18.3.5 |
Gene ID: HRGMv2_3484_6_179
Type: CAZyme
Location: 188042 - 189073 (-)
Type: CAZyme
Location: 188042 - 189073 (-)
Gene ID: HRGMv2_3484_6_180
Type: pfam
Location: 189102 - 190241 (-)
Type: pfam
Location: 189102 - 190241 (-)
Gene ID: HRGMv2_3484_6_181
Type: CAZyme
Location: 190268 - 191389 (-)
Type: CAZyme
Location: 190268 - 191389 (-)
Gene ID: HRGMv2_3484_6_182
Type: CAZyme
Location: 191406 - 192527 (-)
Type: CAZyme
Location: 191406 - 192527 (-)
Gene ID: HRGMv2_3484_6_183
Type: pfam
Location: 192547 - 193893 (-)
Type: pfam
Location: 192547 - 193893 (-)
Gene ID: HRGMv2_3484_6_184
Type: CAZyme
Location: 193943 - 194743 (-)
Type: CAZyme
Location: 193943 - 194743 (-)
Gene ID: HRGMv2_3484_6_185
Type:
Location: 194760 - 195464 (-)
Type:
Location: 194760 - 195464 (-)
Gene ID: HRGMv2_3484_6_186
Type: pfam
Location: 195466 - 196734 (-)
Type: pfam
Location: 195466 - 196734 (-)
Gene ID: HRGMv2_3484_6_187
Type: TC
Location: 196759 - 198213 (-)
Type: TC
Location: 196759 - 198213 (-)
Gene ID: HRGMv2_3484_6_188
Type: TC
Location: 198261 - 199121 (-)
Type: TC
Location: 198261 - 199121 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Mitsuokella
Species
Mitsuokella multacida
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.