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Cluster: HRGMv2_3484_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3484_1 HRGMv2_3484_1_71 95022 96356 - 2.A.40.7.2
pfam HRGMv2_3484_1 HRGMv2_3484_1_72 96420 97436 - A_deaminase
TC HRGMv2_3484_1 HRGMv2_3484_1_73 97634 98554 - 2.A.7.3.12
NULL(UNKNOWN) HRGMv2_3484_1 HRGMv2_3484_1_74 98617 100068 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3484_1 HRGMv2_3484_1_75 100268 101689 + GH84
TC HRGMv2_3484_1 HRGMv2_3484_1_76 101711 102109 - 1.A.43.1.11
pfam HRGMv2_3484_1 HRGMv2_3484_1_77 102285 103010 + RNase_T
TF HRGMv2_3484_1 HRGMv2_3484_1_78 103425 104348 + HTH_1
TC HRGMv2_3484_1 HRGMv2_3484_1_79 104636 105886 + 2.A.1.46.5
Gene ID: HRGMv2_3484_1_71
Type: TC
Location: 95022 - 96356 (-)
Gene ID: HRGMv2_3484_1_72
Type: pfam
Location: 96420 - 97436 (-)
Gene ID: HRGMv2_3484_1_73
Type: TC
Location: 97634 - 98554 (-)
Gene ID: HRGMv2_3484_1_74
Type:
Location: 98617 - 100068 (-)
Gene ID: HRGMv2_3484_1_75
Type: CAZyme
Location: 100268 - 101689 (+)
Gene ID: HRGMv2_3484_1_76
Type: TC
Location: 101711 - 102109 (-)
Gene ID: HRGMv2_3484_1_77
Type: pfam
Location: 102285 - 103010 (+)
Gene ID: HRGMv2_3484_1_78
Type: TF
Location: 103425 - 104348 (+)
Gene ID: HRGMv2_3484_1_79
Type: TC
Location: 104636 - 105886 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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