Cluster: HRGMv2_3480_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3480
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3480_1 | HRGMv2_3480_1_9 | 11577 | 13337 | + | 3.A.1.135.6 |
| TC | HRGMv2_3480_1 | HRGMv2_3480_1_10 | 13330 | 15372 | + | 3.A.1.135.6 |
| CAZyme | HRGMv2_3480_1 | HRGMv2_3480_1_11 | 15457 | 16680 | + | GT5 |
| CAZyme | HRGMv2_3480_1 | HRGMv2_3480_1_12 | 16694 | 17914 | + | GH57 |
| pfam | HRGMv2_3480_1 | HRGMv2_3480_1_13 | 17952 | 18725 | - | PTA_PTB |
| NULL(UNKNOWN) | HRGMv2_3480_1 | HRGMv2_3480_1_14 | 18728 | 19420 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3480_1 | HRGMv2_3480_1_15 | 19417 | 21255 | - | 9.B.97.5.1 |
Gene ID: HRGMv2_3480_1_9
Type: TC
Location: 11577 - 13337 (+)
Type: TC
Location: 11577 - 13337 (+)
Gene ID: HRGMv2_3480_1_10
Type: TC
Location: 13330 - 15372 (+)
Type: TC
Location: 13330 - 15372 (+)
Gene ID: HRGMv2_3480_1_11
Type: CAZyme
Location: 15457 - 16680 (+)
Type: CAZyme
Location: 15457 - 16680 (+)
Gene ID: HRGMv2_3480_1_12
Type: CAZyme
Location: 16694 - 17914 (+)
Type: CAZyme
Location: 16694 - 17914 (+)
Gene ID: HRGMv2_3480_1_13
Type: pfam
Location: 17952 - 18725 (-)
Type: pfam
Location: 17952 - 18725 (-)
Gene ID: HRGMv2_3480_1_14
Type:
Location: 18728 - 19420 (-)
Type:
Location: 18728 - 19420 (-)
Gene ID: HRGMv2_3480_1_15
Type: TC
Location: 19417 - 21255 (-)
Type: TC
Location: 19417 - 21255 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Patescibacteria
Class
Saccharimonadia
Order
Saccharimonadales
Family
Nanosyncoccaceae
Genus
UBA2834
Species
UBA2834 sp004561445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.