Cluster: HRGMv2_3474_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3474
- CGC Family ID: CGCFAM_00105
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3474_2 | HRGMv2_3474_2_104 | 119802 | 120779 | + | 2.A.9.3.2 |
| pfam | HRGMv2_3474_2 | HRGMv2_3474_2_105 | 120789 | 121250 | + | R3H |
| pfam | HRGMv2_3474_2 | HRGMv2_3474_2_106 | 121311 | 121811 | - | GtrA_DPMS_TM |
| CAZyme | HRGMv2_3474_2 | HRGMv2_3474_2_107 | 121780 | 122781 | - | GT2 |
| CAZyme | HRGMv2_3474_2 | HRGMv2_3474_2_108 | 122801 | 123868 | - | GT2 |
| TC | HRGMv2_3474_2 | HRGMv2_3474_2_109 | 123908 | 124741 | + | 3.A.1.103.4 |
| TC | HRGMv2_3474_2 | HRGMv2_3474_2_110 | 124743 | 125939 | + | 3.A.1.103.5 |
Gene ID: HRGMv2_3474_2_104
Type: TC
Location: 119802 - 120779 (+)
Type: TC
Location: 119802 - 120779 (+)
Gene ID: HRGMv2_3474_2_105
Type: pfam
Location: 120789 - 121250 (+)
Type: pfam
Location: 120789 - 121250 (+)
Gene ID: HRGMv2_3474_2_106
Type: pfam
Location: 121311 - 121811 (-)
Type: pfam
Location: 121311 - 121811 (-)
Gene ID: HRGMv2_3474_2_107
Type: CAZyme
Location: 121780 - 122781 (-)
Type: CAZyme
Location: 121780 - 122781 (-)
Gene ID: HRGMv2_3474_2_108
Type: CAZyme
Location: 122801 - 123868 (-)
Type: CAZyme
Location: 122801 - 123868 (-)
Gene ID: HRGMv2_3474_2_109
Type: TC
Location: 123908 - 124741 (+)
Type: TC
Location: 123908 - 124741 (+)
Gene ID: HRGMv2_3474_2_110
Type: TC
Location: 124743 - 125939 (+)
Type: TC
Location: 124743 - 125939 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Patescibacteria
Class
Saccharimonadia
Order
Saccharimonadales
Family
Nanoperiomorbaceae
Genus
Nanoperiomorbus
Species
Nanoperiomorbus sp958399925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.