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Cluster: HRGMv2_3458_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3458_4 HRGMv2_3458_4_19 19219 20850 + GH13_31
pfam HRGMv2_3458_4 HRGMv2_3458_4_20 20908 21399 + dCMP_cyt_deam_1 | MafB19-deam
NULL(UNKNOWN) HRGMv2_3458_4 HRGMv2_3458_4_21 21386 21604 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3458_4 HRGMv2_3458_4_22 21597 22418 + 3.A.1.26.7
TC HRGMv2_3458_4 HRGMv2_3458_4_23 22409 23266 + 3.A.1.26.9
TC HRGMv2_3458_4 HRGMv2_3458_4_24 23266 24126 + 3.A.1.25.6
Gene ID: HRGMv2_3458_4_19
Type: CAZyme
Location: 19219 - 20850 (+)
Gene ID: HRGMv2_3458_4_20
Type: pfam
Location: 20908 - 21399 (+)
Gene ID: HRGMv2_3458_4_21
Type:
Location: 21386 - 21604 (+)
Gene ID: HRGMv2_3458_4_22
Type: TC
Location: 21597 - 22418 (+)
Gene ID: HRGMv2_3458_4_23
Type: TC
Location: 22409 - 23266 (+)
Gene ID: HRGMv2_3458_4_24
Type: TC
Location: 23266 - 24126 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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