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Cluster: HRGMv2_3458_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3458_3 HRGMv2_3458_3_53 58820 60157 - GH32
CAZyme HRGMv2_3458_3 HRGMv2_3458_3_54 60157 62643 - CBM38 | CBM38 | CBM38
CAZyme HRGMv2_3458_3 HRGMv2_3458_3_55 62645 65191 - GH32
TC HRGMv2_3458_3 HRGMv2_3458_3_56 65203 66129 - 3.A.1.1.20
TC HRGMv2_3458_3 HRGMv2_3458_3_57 66126 67103 - 3.A.1.1.20
TC HRGMv2_3458_3 HRGMv2_3458_3_58 67119 68414 - 3.A.1.1.20
TF HRGMv2_3458_3 HRGMv2_3458_3_59 68427 69401 - LacI
CAZyme HRGMv2_3458_3 HRGMv2_3458_3_60 69382 72927 - CBM66 | GH32
TC HRGMv2_3458_3 HRGMv2_3458_3_61 72930 74252 - 3.A.1.1.20
Gene ID: HRGMv2_3458_3_53
Type: CAZyme
Location: 58820 - 60157 (-)
Gene ID: HRGMv2_3458_3_54
Type: CAZyme
Location: 60157 - 62643 (-)
Gene ID: HRGMv2_3458_3_55
Type: CAZyme
Location: 62645 - 65191 (-)
Gene ID: HRGMv2_3458_3_56
Type: TC
Location: 65203 - 66129 (-)
Gene ID: HRGMv2_3458_3_57
Type: TC
Location: 66126 - 67103 (-)
Gene ID: HRGMv2_3458_3_58
Type: TC
Location: 67119 - 68414 (-)
Gene ID: HRGMv2_3458_3_59
Type: TF
Location: 68427 - 69401 (-)
Gene ID: HRGMv2_3458_3_60
Type: CAZyme
Location: 69382 - 72927 (-)
Gene ID: HRGMv2_3458_3_61
Type: TC
Location: 72930 - 74252 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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