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Cluster: HRGMv2_3458_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3458_1 HRGMv2_3458_1_44 51138 53540 - GH43_32
pfam HRGMv2_3458_1 HRGMv2_3458_1_45 53553 55382 - CBM9_1
NULL(UNKNOWN) HRGMv2_3458_1 HRGMv2_3458_1_46 55379 55510 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3458_1 HRGMv2_3458_1_47 55507 57486 - GH43
TC HRGMv2_3458_1 HRGMv2_3458_1_48 57486 58424 - 3.A.1.1.39
TC HRGMv2_3458_1 HRGMv2_3458_1_49 58427 59359 - 3.A.1.1.20
Gene ID: HRGMv2_3458_1_44
Type: CAZyme
Location: 51138 - 53540 (-)
Gene ID: HRGMv2_3458_1_45
Type: pfam
Location: 53553 - 55382 (-)
Gene ID: HRGMv2_3458_1_46
Type:
Location: 55379 - 55510 (-)
Gene ID: HRGMv2_3458_1_47
Type: CAZyme
Location: 55507 - 57486 (-)
Gene ID: HRGMv2_3458_1_48
Type: TC
Location: 57486 - 58424 (-)
Gene ID: HRGMv2_3458_1_49
Type: TC
Location: 58427 - 59359 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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