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Cluster: HRGMv2_3458_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3458_15 HRGMv2_3458_15_1 93 1913 + GH136
pfam HRGMv2_3458_15 HRGMv2_3458_15_2 1925 5722 + HL_N-beta
pfam HRGMv2_3458_15 HRGMv2_3458_15_3 5725 7620 + Flg_new | Flg_new | Flg_new | Flg_new
CAZyme HRGMv2_3458_15 HRGMv2_3458_15_4 7627 8652 + CE20
pfam HRGMv2_3458_15 HRGMv2_3458_15_5 8656 9252 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_3458_15 HRGMv2_3458_15_6 9249 11693 + GH110
CAZyme HRGMv2_3458_15 HRGMv2_3458_15_7 11723 12958 - GH109
NULL(UNKNOWN) HRGMv2_3458_15 HRGMv2_3458_15_8 13280 15058 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3458_15 HRGMv2_3458_15_9 15051 16235 + Y_phosphatase3
CAZyme HRGMv2_3458_15 HRGMv2_3458_15_10 16232 20488 + CBM67
STP HRGMv2_3458_15 HRGMv2_3458_15_11 20504 21862 + SBP_bac_1
TC HRGMv2_3458_15 HRGMv2_3458_15_12 21873 22802 + 3.A.1.1.34
TC HRGMv2_3458_15 HRGMv2_3458_15_13 22799 23680 + 3.A.1.1.18
TF HRGMv2_3458_15 HRGMv2_3458_15_14 23720 24574 - HTH_AraC
CAZyme HRGMv2_3458_15 HRGMv2_3458_15_15 24793 27177 + GH106
CAZyme HRGMv2_3458_15 HRGMv2_3458_15_16 27183 29405 + GH3
CAZyme HRGMv2_3458_15 HRGMv2_3458_15_17 29402 30655 + GH37
Gene ID: HRGMv2_3458_15_1
Type: CAZyme
Location: 93 - 1913 (+)
Gene ID: HRGMv2_3458_15_2
Type: pfam
Location: 1925 - 5722 (+)
Gene ID: HRGMv2_3458_15_3
Type: pfam
Location: 5725 - 7620 (+)
Gene ID: HRGMv2_3458_15_4
Type: CAZyme
Location: 7627 - 8652 (+)
Gene ID: HRGMv2_3458_15_5
Type: pfam
Location: 8656 - 9252 (+)
Gene ID: HRGMv2_3458_15_6
Type: CAZyme
Location: 9249 - 11693 (+)
Gene ID: HRGMv2_3458_15_7
Type: CAZyme
Location: 11723 - 12958 (-)
Gene ID: HRGMv2_3458_15_8
Type:
Location: 13280 - 15058 (+)
Gene ID: HRGMv2_3458_15_9
Type: pfam
Location: 15051 - 16235 (+)
Gene ID: HRGMv2_3458_15_10
Type: CAZyme
Location: 16232 - 20488 (+)
Gene ID: HRGMv2_3458_15_11
Type: STP
Location: 20504 - 21862 (+)
Gene ID: HRGMv2_3458_15_12
Type: TC
Location: 21873 - 22802 (+)
Gene ID: HRGMv2_3458_15_13
Type: TC
Location: 22799 - 23680 (+)
Gene ID: HRGMv2_3458_15_14
Type: TF
Location: 23720 - 24574 (-)
Gene ID: HRGMv2_3458_15_15
Type: CAZyme
Location: 24793 - 27177 (+)
Gene ID: HRGMv2_3458_15_16
Type: CAZyme
Location: 27183 - 29405 (+)
Gene ID: HRGMv2_3458_15_17
Type: CAZyme
Location: 29402 - 30655 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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