Cluster: HRGMv2_3449_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3449
- CGC Family ID: CGCFAM_00700
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3449_11 | HRGMv2_3449_11_36 | 38031 | 39080 | + | GT113 |
| pfam | HRGMv2_3449_11 | HRGMv2_3449_11_37 | 39091 | 41019 | + | Gly_radical | PFL-like |
| pfam | HRGMv2_3449_11 | HRGMv2_3449_11_38 | 41000 | 41758 | + | Radical_SAM | Fer4_12 |
| TC | HRGMv2_3449_11 | HRGMv2_3449_11_39 | 41836 | 43341 | + | 2.A.66.2.16 |
Gene ID: HRGMv2_3449_11_36
Type: CAZyme
Location: 38031 - 39080 (+)
Type: CAZyme
Location: 38031 - 39080 (+)
Gene ID: HRGMv2_3449_11_37
Type: pfam
Location: 39091 - 41019 (+)
Type: pfam
Location: 39091 - 41019 (+)
Gene ID: HRGMv2_3449_11_38
Type: pfam
Location: 41000 - 41758 (+)
Type: pfam
Location: 41000 - 41758 (+)
Gene ID: HRGMv2_3449_11_39
Type: TC
Location: 41836 - 43341 (+)
Type: TC
Location: 41836 - 43341 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Species
CAG-449 sp900551385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.