Cluster: HRGMv2_3449_CGC7
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3449
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3449_8 | HRGMv2_3449_8_64 | 76020 | 78407 | - | GH3 |
| sulfatase | HRGMv2_3449_8 | HRGMv2_3449_8_65 | 78432 | 79142 | - | S1_14 |
| pfam | HRGMv2_3449_8 | HRGMv2_3449_8_66 | 79142 | 80905 | - | MFS_2 |
| CAZyme | HRGMv2_3449_8 | HRGMv2_3449_8_67 | 80905 | 83385 | - | GH3 |
| CAZyme | HRGMv2_3449_8 | HRGMv2_3449_8_68 | 83386 | 85713 | - | GH2 |
| TF | HRGMv2_3449_8 | HRGMv2_3449_8_69 | 85838 | 87025 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_3449_8 | HRGMv2_3449_8_70 | 88437 | 88856 | - | YqeY |
| TC | HRGMv2_3449_8 | HRGMv2_3449_8_71 | 88920 | 90773 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_3449_8 | HRGMv2_3449_8_72 | 90761 | 91396 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_3449_8 | HRGMv2_3449_8_73 | 91617 | 92156 | + | HTH_3 |
| TC | HRGMv2_3449_8 | HRGMv2_3449_8_74 | 92178 | 93701 | + | 3.A.1.11.8 |
| TC | HRGMv2_3449_8 | HRGMv2_3449_8_75 | 93691 | 94488 | + | 3.A.1.11.2 |
| TC | HRGMv2_3449_8 | HRGMv2_3449_8_76 | 94482 | 95282 | + | 3.A.1.11.7 |
| TC | HRGMv2_3449_8 | HRGMv2_3449_8_77 | 95287 | 96984 | + | 3.A.1.11.7 |
Gene ID: HRGMv2_3449_8_64
Type: CAZyme
Location: 76020 - 78407 (-)
Type: CAZyme
Location: 76020 - 78407 (-)
Gene ID: HRGMv2_3449_8_65
Type: sulfatase
Location: 78432 - 79142 (-)
Type: sulfatase
Location: 78432 - 79142 (-)
Gene ID: HRGMv2_3449_8_66
Type: pfam
Location: 79142 - 80905 (-)
Type: pfam
Location: 79142 - 80905 (-)
Gene ID: HRGMv2_3449_8_67
Type: CAZyme
Location: 80905 - 83385 (-)
Type: CAZyme
Location: 80905 - 83385 (-)
Gene ID: HRGMv2_3449_8_68
Type: CAZyme
Location: 83386 - 85713 (-)
Type: CAZyme
Location: 83386 - 85713 (-)
Gene ID: HRGMv2_3449_8_69
Type: TF
Location: 85838 - 87025 (+)
Type: TF
Location: 85838 - 87025 (+)
Gene ID: HRGMv2_3449_8_70
Type: pfam
Location: 88437 - 88856 (-)
Type: pfam
Location: 88437 - 88856 (-)
Gene ID: HRGMv2_3449_8_71
Type: TC
Location: 88920 - 90773 (-)
Type: TC
Location: 88920 - 90773 (-)
Gene ID: HRGMv2_3449_8_72
Type:
Location: 90761 - 91396 (-)
Type:
Location: 90761 - 91396 (-)
Gene ID: HRGMv2_3449_8_73
Type: TF
Location: 91617 - 92156 (+)
Type: TF
Location: 91617 - 92156 (+)
Gene ID: HRGMv2_3449_8_74
Type: TC
Location: 92178 - 93701 (+)
Type: TC
Location: 92178 - 93701 (+)
Gene ID: HRGMv2_3449_8_75
Type: TC
Location: 93691 - 94488 (+)
Type: TC
Location: 93691 - 94488 (+)
Gene ID: HRGMv2_3449_8_76
Type: TC
Location: 94482 - 95282 (+)
Type: TC
Location: 94482 - 95282 (+)
Gene ID: HRGMv2_3449_8_77
Type: TC
Location: 95287 - 96984 (+)
Type: TC
Location: 95287 - 96984 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Species
CAG-449 sp900551385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.