Cluster: HRGMv2_3449_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3449
- CGC Family ID: CGCFAM_01469
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3449_8 | HRGMv2_3449_8_36 | 42683 | 43831 | - | CE9 |
| CAZyme | HRGMv2_3449_8 | HRGMv2_3449_8_37 | 43842 | 46346 | - | GH94 |
| pfam | HRGMv2_3449_8 | HRGMv2_3449_8_38 | 46348 | 47760 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_3449_8 | HRGMv2_3449_8_39 | 47772 | 48374 | - | GH16_21 |
| pfam | HRGMv2_3449_8 | HRGMv2_3449_8_40 | 48375 | 49973 | - | Big_3 |
| TC | HRGMv2_3449_8 | HRGMv2_3449_8_41 | 49979 | 51070 | - | 3.A.1.1.26 |
| TF | HRGMv2_3449_8 | HRGMv2_3449_8_42 | 51074 | 52216 | - | 0040266 |
| peptidase | HRGMv2_3449_8 | HRGMv2_3449_8_43 | 52230 | 53795 | - | M26.UNW |
| TC | HRGMv2_3449_8 | HRGMv2_3449_8_44 | 53792 | 54673 | - | 3.A.1.1.39 |
| TC | HRGMv2_3449_8 | HRGMv2_3449_8_45 | 54684 | 55604 | - | 3.A.1.1.6 |
| CAZyme | HRGMv2_3449_8 | HRGMv2_3449_8_46 | 55615 | 56994 | - | GH16 |
Gene ID: HRGMv2_3449_8_36
Type: CAZyme
Location: 42683 - 43831 (-)
Type: CAZyme
Location: 42683 - 43831 (-)
Gene ID: HRGMv2_3449_8_37
Type: CAZyme
Location: 43842 - 46346 (-)
Type: CAZyme
Location: 43842 - 46346 (-)
Gene ID: HRGMv2_3449_8_38
Type: pfam
Location: 46348 - 47760 (-)
Type: pfam
Location: 46348 - 47760 (-)
Gene ID: HRGMv2_3449_8_39
Type: CAZyme
Location: 47772 - 48374 (-)
Type: CAZyme
Location: 47772 - 48374 (-)
Gene ID: HRGMv2_3449_8_40
Type: pfam
Location: 48375 - 49973 (-)
Type: pfam
Location: 48375 - 49973 (-)
Gene ID: HRGMv2_3449_8_41
Type: TC
Location: 49979 - 51070 (-)
Type: TC
Location: 49979 - 51070 (-)
Gene ID: HRGMv2_3449_8_42
Type: TF
Location: 51074 - 52216 (-)
Type: TF
Location: 51074 - 52216 (-)
Gene ID: HRGMv2_3449_8_43
Type: peptidase
Location: 52230 - 53795 (-)
Type: peptidase
Location: 52230 - 53795 (-)
Gene ID: HRGMv2_3449_8_44
Type: TC
Location: 53792 - 54673 (-)
Type: TC
Location: 53792 - 54673 (-)
Gene ID: HRGMv2_3449_8_45
Type: TC
Location: 54684 - 55604 (-)
Type: TC
Location: 54684 - 55604 (-)
Gene ID: HRGMv2_3449_8_46
Type: CAZyme
Location: 55615 - 56994 (-)
Type: CAZyme
Location: 55615 - 56994 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Species
CAG-449 sp900551385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.