Cluster: HRGMv2_3449_CGC13
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3449
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3449_19 | HRGMv2_3449_19_13 | 12869 | 15151 | - | GH78 |
| NULL(UNKNOWN) | HRGMv2_3449_19 | HRGMv2_3449_19_14 | 15126 | 16628 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3449_19 | HRGMv2_3449_19_15 | 16691 | 18871 | - | Big_2 |
| CAZyme | HRGMv2_3449_19 | HRGMv2_3449_19_16 | 18904 | 21903 | - | GH110 |
| CAZyme | HRGMv2_3449_19 | HRGMv2_3449_19_17 | 21900 | 23900 | - | GH110 |
| NULL(UNKNOWN) | HRGMv2_3449_19 | HRGMv2_3449_19_18 | 23904 | 25634 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3449_19 | HRGMv2_3449_19_19 | 25646 | 26512 | - | 3.A.1.1.29 |
| TC | HRGMv2_3449_19 | HRGMv2_3449_19_20 | 26522 | 27493 | - | 3.A.1.1.10 |
| TF | HRGMv2_3449_19 | HRGMv2_3449_19_21 | 27709 | 28605 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_3449_19 | HRGMv2_3449_19_22 | 28559 | 29860 | - | RDD |
| TC | HRGMv2_3449_19 | HRGMv2_3449_19_23 | 29869 | 31596 | - | 3.A.1.1.22 |
Gene ID: HRGMv2_3449_19_13
Type: CAZyme
Location: 12869 - 15151 (-)
Type: CAZyme
Location: 12869 - 15151 (-)
Gene ID: HRGMv2_3449_19_14
Type:
Location: 15126 - 16628 (-)
Type:
Location: 15126 - 16628 (-)
Gene ID: HRGMv2_3449_19_15
Type: pfam
Location: 16691 - 18871 (-)
Type: pfam
Location: 16691 - 18871 (-)
Gene ID: HRGMv2_3449_19_16
Type: CAZyme
Location: 18904 - 21903 (-)
Type: CAZyme
Location: 18904 - 21903 (-)
Gene ID: HRGMv2_3449_19_17
Type: CAZyme
Location: 21900 - 23900 (-)
Type: CAZyme
Location: 21900 - 23900 (-)
Gene ID: HRGMv2_3449_19_18
Type:
Location: 23904 - 25634 (-)
Type:
Location: 23904 - 25634 (-)
Gene ID: HRGMv2_3449_19_19
Type: TC
Location: 25646 - 26512 (-)
Type: TC
Location: 25646 - 26512 (-)
Gene ID: HRGMv2_3449_19_20
Type: TC
Location: 26522 - 27493 (-)
Type: TC
Location: 26522 - 27493 (-)
Gene ID: HRGMv2_3449_19_21
Type: TF
Location: 27709 - 28605 (+)
Type: TF
Location: 27709 - 28605 (+)
Gene ID: HRGMv2_3449_19_22
Type: pfam
Location: 28559 - 29860 (-)
Type: pfam
Location: 28559 - 29860 (-)
Gene ID: HRGMv2_3449_19_23
Type: TC
Location: 29869 - 31596 (-)
Type: TC
Location: 29869 - 31596 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Species
CAG-449 sp900551385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.